| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1682 |
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| Symbol | |
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| ID | 5208639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2073012 |
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| End bp | 2074436 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640595289 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_001276023 |
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| Protein GI | 148655818 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5529] Pyocin large subunit |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGACGC CGACTCCCAC CGCCACGCCC TCCCCCACGC CTGCGGCGGT CGCCCCGCCG
ACGCTGAGCG AGACGTATGC CTACGACCGG CTGGGGAACC TGCGCGTCAA AGCCGGCGTG
GGATATGAGT ACCCGGCGGC GCGCCAGCCG CGCCCGCACG CCCCCATCCG CGTCGGCGGG
CAGCCGTATG CCTACGACGC CAATGGCAAC CTCACGAGCG GCGGCGGGCG GACCTTCGTC
TGGAACGGCT GGAACCAGCT CGCCGGCGTC TCCCAGGCGG GCCTGACCGA AACCTATACC
TATGACGCCG CCGGCGCGCG GGTGACGCGC ACGAGCAACG GCGCGACCGT CGTCACCGTC
GCCGACCTCT GGGAGCGCAC CGTCGGCGGC GCGACGACGC ACTTCTACCG CTTCGGCGCC
GACATCATCG GCGTGCGGCG CAGCGACCAG GGAACGCTGT ATCTCTTCAG CGACCACCTG
GGAAGCGTGA GCGCAGCGAC GACCGCGAGC GGCACGCTCG TAGGAATGCA GCACTACGAC
CCGTGGGGGC GGGTGCGCAC CGGCGGCATC GGACTGACGG CGCGCACCTT CACTGGACAG
CGGCTTGATG CGACCGGATT GTTGTATTAC CATGCTCGGT ACTATGATCC GACGCTCGGA
CGGTTCATCT CGCCGGATAG CATCGTTCCT GAGCCGGGCA ACCCGCAGAG CTTCAACCGC
TTTGCGTACG TTTACAACAA TCCGCTGAAG TACACCGACC CGACGGGGCA CTGGATCGAG
AGCGCGGTTG ATATTGCATT CATCGCCTAC GATATCTGGG ACATTACTCA GAACGGGCTG
ACGTGGGACA ATGGACTGGC GCTGGCGGCG GATGTGGGCG GCCTGCTCCT GCCGGGGCTG
ACCGGCTTGG GCATGGCGGT GCGCGGCGGC AGGGCGCTCG CACGGACCGA TGACATCCTG
GACATGGTGC GGGCGGTGTC CTGGACCGAA CGCTTCGCCG GCGCCAGCCC GGAGGTCCGG
CGTGGGGTTG CGTGGCTGGA GAAGATGGTG CAGGACGAGC GCATTCCGGA TTCGTATCGC
CGCGGCTTTG CGGCCGAGCT CCTGCGGGCA GAGGAGTACT ACAAGGCCGG CAAGCTGCAG
GCGGTGGAGG CAGTGGTCGA GGGAGGCCGT GTCGACCTGC TCCTGGTCAC CGATGACATC
GTGGAGGTCA AGTACTGGAC GCAAAGTCAC ACTGCTAAAA ACATAGATGA GCTTGCCCGC
CAGTTGACGA GATATCAAGC CACGGGTCGG CCGATCCTCC TGGAGTTGTT CCGTACCAAG
ACCGACCCCA TCACCGAGGG GTATATTGAG GATTTGCTGA AAGCCCTACA AACAGCGGGA
GTGAAGATCA CGCGCGAGCA GATTCGCCTC GTGGAGTGGC CCTGA
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| Protein sequence | MPTPTPTATP SPTPAAVAPP TLSETYAYDR LGNLRVKAGV GYEYPAARQP RPHAPIRVGG
QPYAYDANGN LTSGGGRTFV WNGWNQLAGV SQAGLTETYT YDAAGARVTR TSNGATVVTV
ADLWERTVGG ATTHFYRFGA DIIGVRRSDQ GTLYLFSDHL GSVSAATTAS GTLVGMQHYD
PWGRVRTGGI GLTARTFTGQ RLDATGLLYY HARYYDPTLG RFISPDSIVP EPGNPQSFNR
FAYVYNNPLK YTDPTGHWIE SAVDIAFIAY DIWDITQNGL TWDNGLALAA DVGGLLLPGL
TGLGMAVRGG RALARTDDIL DMVRAVSWTE RFAGASPEVR RGVAWLEKMV QDERIPDSYR
RGFAAELLRA EEYYKAGKLQ AVEAVVEGGR VDLLLVTDDI VEVKYWTQSH TAKNIDELAR
QLTRYQATGR PILLELFRTK TDPITEGYIE DLLKALQTAG VKITREQIRL VEWP
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