| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1661 |
|---|
| Symbol | |
|---|
| ID | 5208618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 2037666 |
|---|
| End bp | 2040590 |
|---|
| Gene Length | 2925 bp |
|---|
| Protein Length | 974 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640595269 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001276003 |
|---|
| Protein GI | 148655798 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.254105 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGTC GGACATTGAT TACACGATTG CGCCGCCACA TGCGCCTCGC GCGCGCGCTC
GCCGGGCGCT CGCCGCTTGC GGTGCGCCAG GCTGTGGGTC AACCGCTTCT GTGGGCGGTT
GGGCGCGCCG ATACGCCTCC CCGGCGAGCG CGCGCGCCGG GTTTGATCCG GCTTGCGCCG
GATTCTCGTG CGTTTACCGA CGCATATGCT GTGCTGCCGC CAGTTGCGCC GGAAACGCCG
CCGGTTGCCG ATCCGCCACG CTTCGATGAG CAGGAATTGC GGGAGGTTGC CAGCGAAGCG
CAGGCGGTGC CGGTCGAAAC TGCGTCCCCT GCGCCTGGTG CGCCTGCGGT GGAGACCGGT
GCATCCCCGG CGACGATCAT CGATGCAGCG CGCGCCTGGG TTGCACAACA GTTGCGTGAT
CGAACAGCGG TTCAATCCGT GGACCGATCC GTTGCGCAAC CTGAACCGGC GCCGGACAGT
CGTCCGACGG CAGCGCCATC GCCGCCCGCT GAGGTGCGCG TCGCCCGTCC ACCGCGCTTC
CTCGAGCGCA CACCTCCCCG CCGTGAAACA TCGCCGCCAT CGCAACCTGC AGCACCGCCG
GACGGCAGTG CTGCACCATC ATTCGACCGC TCGCCGGCTG CGTGGATGGA GCGCCTGCGC
GCCGATGCCC GCCGTCGGTC GGAGGCGGCG ACGCAGGCGT CGTCCGCGGT GCCGGAGGAA
GGAACGCCGC CGGAAATTGT TGCGTCGCCG CTTCAGGGAC AGGCAGAACA GGCACGCGAT
GACGGGGATT ATCATACCGG GATGCCAGAT TCCATTCTTG CCCCTGATGC CGCTCCTGCT
CAGCGTGACG CCGGGCAGGA TGTTCCGGCG CAGCAATCGC CCCTCCCGCC TGCCGACATG
TCCGCCCGTG CACCTGCGGC GGTTCCGACG ACAGAACCGA CTGCACCTGC GGATGATACC
GCATCAGCAT TCGCCCCGCC GCCCGCTGTC GCGCCAGCAT CGCCGGGCAT GTTGGAGCCG
GAAGCGCCTT CACTGCCAGA AGGTGGCGCT ACGCCAGCAT TCGCTCCCCT GCCCACACCT
GCGCCAGCAT CGCCGGGCAC GCCGGAGCCG GAAGCGCCTT CACCGCCAGA AGGTGGCGCT
ATGCCAGCAT TCGCTCCTCC GCCTGAGGTT GCGCCAGAAT TGTCAGACAC GCCGGAGACG
GGTGCGCCTT TGCTGCCGGA AAGCAGTGCT GCGTCAGCAT CGCCGGACAT GTCGGAGACG
GGTGCGCCTT TGCTGCCGGA AAGCAGTGCT GCGTCAGCAT CGCCGGACAT GTCGGAGACG
GGTGCGCCTT CGCTGTCGGA AAGCAGCGCT GCGCCAGCAG TCGCCCACCC GTCTGCAGCC
ATCCAGGGAT CGCCGCGCGC GCCGGAGGAA AGCGAATCTT CGCCAGCAGG ACTGATCGCA
TCGCCGGAAC GTGGCAGCGC TCCCGTGTTC GACCGCTCAC CGGCTGCGTG GATGGAGCGC
CTGCGCGCCG ATGCCCGCCG TCGGTCGGAG GCGGCGTCAC AGTCGGCACC GCAGGCATCG
GGGGAGGGTG CGACGCCTTT GACGCCGGAA TCTGCGGCGC AGCCGGTTCA GCGCCGGATC
GAACGTCGGG GTGGCGCCGA TCACGAGCGT GTCGCCGCCG TACAGGGTGA TGCCGGGCAG
GATGTTCCGG TGCGACAATC AACCCATCTC GACATGCCCG CGCGCGCTCC AGAACCGGTT
GCGGCGCCGG TGGACGACGA TGCGCCGGAG TTCGACCGCT CAGTGGAAGC CTGGATGGAA
CGTCTGCGCG CCGATGAGCG CCGCCGCCAG AAAGAAGCTG CACAGTCGCC GGATCGTTCT
TCTGTGGAAG CGTCTCAACC GCTGCCCGAC GCGCCTCCGG TGGCGCAACC GGCGGGAGCG
CCTCAGTCGG GTGGTGCGCT GTGGGTCGAG TCGGGCAGGG GACAGCAACG CTCCGGGGCG
CAACCAACCG GCGCGTCTCA GCCGGGTATC GCCGCATCTC CAGCGCGCGC AACGCGCTTT
GCGCCGCCGG TGGGCGCCGC CGTTCGATCC ACAACGCCCG GCGGGGCGCG GCTTCCCGCC
CGTCCTGCAC CATCAGCGCC GCTGCTGTCT GAGTCGAATC GGCGTTTCCT GCGCGCCGCG
GTCGGCGTCG ATCCGGCGAC GGTACGCCTG TCGCGCGGAC AGGATGCCGG TCGCCTGACG
TCGGCATACC GCGCCGATGC CGTCACATTT GGCGACGATG TGGCGCTGGC GCCCGGCAGG
GGCGATGAAA CCGCCGAAGG TCTCGGTCTG CTGGCGCACG AACTGACCCA CGTGGCGCGT
CGGCGCGATC CAACGGCCAT TCCGCCCATC GCCCGACCTG CCGAACGGCG TCCCGGATTC
CGTCCAGCGT CTCCGGGACC TGCGACGGAT GAGGAGGCGC TGGCGCGCAT CGTCGAAGCG
CAGACCGTTC AAGCTGCGCG GATGCGCTTT GCACCGCCGG TCTTCCCCGC CAGAGCGGAG
GCGCCGGTAG CGCAACCGTT CGATAAACAG GAGAGCGCAC GCACTGCGCC GCCGGTCGAA
GACGCGCCTG CTGCGCCGGA TCGCGGGCGA TGGGGAAACC TGCCTGCCCC CTGGGAGCCG
CTGCCCGACT GGCTTGCGCC TTCGAGATCG GTGGAAGCGC CGCCGTTACC GGTAGTAACC
GTCGCGCCTG CACCGCCAGC GTTCACAACA CCACCCCAAC CGGGCGCGCC CGTCGTGCAT
GCGGCTGAGA CAGCGCGCAC CCTGCCCGCG CCTCAGCAAC GAGAAACACC AGCGCAGGAG
CAGGCGCCAG CCCCTGCGCC CGATATCGAC GCCCTTGCGC GTCAGGTCTA TGCCGTCCTG
AAACGCCGCC TGGCGGCTGA ACGCCGCCGC AGCGGATGGG AGTGA
|
|---|
| Protein sequence | MIRRTLITRL RRHMRLARAL AGRSPLAVRQ AVGQPLLWAV GRADTPPRRA RAPGLIRLAP
DSRAFTDAYA VLPPVAPETP PVADPPRFDE QELREVASEA QAVPVETASP APGAPAVETG
ASPATIIDAA RAWVAQQLRD RTAVQSVDRS VAQPEPAPDS RPTAAPSPPA EVRVARPPRF
LERTPPRRET SPPSQPAAPP DGSAAPSFDR SPAAWMERLR ADARRRSEAA TQASSAVPEE
GTPPEIVASP LQGQAEQARD DGDYHTGMPD SILAPDAAPA QRDAGQDVPA QQSPLPPADM
SARAPAAVPT TEPTAPADDT ASAFAPPPAV APASPGMLEP EAPSLPEGGA TPAFAPLPTP
APASPGTPEP EAPSPPEGGA MPAFAPPPEV APELSDTPET GAPLLPESSA ASASPDMSET
GAPLLPESSA ASASPDMSET GAPSLSESSA APAVAHPSAA IQGSPRAPEE SESSPAGLIA
SPERGSAPVF DRSPAAWMER LRADARRRSE AASQSAPQAS GEGATPLTPE SAAQPVQRRI
ERRGGADHER VAAVQGDAGQ DVPVRQSTHL DMPARAPEPV AAPVDDDAPE FDRSVEAWME
RLRADERRRQ KEAAQSPDRS SVEASQPLPD APPVAQPAGA PQSGGALWVE SGRGQQRSGA
QPTGASQPGI AASPARATRF APPVGAAVRS TTPGGARLPA RPAPSAPLLS ESNRRFLRAA
VGVDPATVRL SRGQDAGRLT SAYRADAVTF GDDVALAPGR GDETAEGLGL LAHELTHVAR
RRDPTAIPPI ARPAERRPGF RPASPGPATD EEALARIVEA QTVQAARMRF APPVFPARAE
APVAQPFDKQ ESARTAPPVE DAPAAPDRGR WGNLPAPWEP LPDWLAPSRS VEAPPLPVVT
VAPAPPAFTT PPQPGAPVVH AAETARTLPA PQQRETPAQE QAPAPAPDID ALARQVYAVL
KRRLAAERRR SGWE
|
|---|
| |