Gene RoseRS_1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1626 
Symbol 
ID5208581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1995016 
End bp1996101 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content61% 
IMG OID640595232 
Producthypothetical protein 
Protein accessionYP_001275968 
Protein GI148655763 
COG category[S] Function unknown 
COG ID[COG5282] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03624] putative hydrolase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCG CTGCCGGCAG CATGCCGCGT CCACGAATGA TCGACTGGTT GCAGGCGCGC 
AATGTCGGCG TCGCGGTTTC ACAGTCATAC CTTGCGCCGA TGATCGATCG CGCTGCGCGT
CAGGATCAGT ATCGTCAGTT AGTGCAGCGC AGCGAGCCGT TGATCGCCGC GTATATGGGG
GTGCGCCTGC CGCGCCCGGT CGAACGCATC TACGTTTTTG ACCGGGCGGA ATGGATCGAA
GCCAACCTCT CCGCCTTTCA GTCGCTTTTT GCGCCGCTCG AAGAGTTGTA CGATGAAATC
AGCGCGCGTC AGGGGGTGGT CGGGTTGCTC ATGGGGCAAC TCAACAGTCA ACTGCTGGGG
ATGCAGATGG GCGCGCTGAT CGGGTTCCTG GCGCGGCGCG TGCTCGGTCA GTACGATCTC
GGTCTGCTCT CGCCCGATCC GGATCTGCGC GGCGCGCTCT ACTTCGTCGA GCCGAACATC
ACGCGCATCT GCGCCCAACT CGGTCTTGAT GGCGACGACT TCCGCATGTG GATCGCACTC
CACGAAACGA CGCACGTCTT TGAGTTCGAA GCATTCCCCT GGGTGCGCGA CTATTTTCAG
GATCTGCTCC GTCAATTTAT CGGTCGGGTG AACGACCAGG CCGCGATGCT CAGCGTCGGT
ATCGTGCGAT TGATCGAACG GTTGTTGCAG GGTCAACCGA TCGACCGACA CTGGATCGAG
TTGATGCTGA CGCCTGAGCA ACAGGCGATC TTTACCCGCA TGCAGGCGTT GATGTCGGTG
GTGGAAGGGT ATTCCAACCA CATTATGAAC GTCATCGGCG GGCAGTTGCT CCCCAGTTAT
CAGCAGATCG AAGCACGGGT ACGCCAGCGC CAGTTGCGTC GCCCGCTGAT CGAGGAAGCG
TTCAATCGTT TGACCGGTAT GGACCTGAAA CTGGCGCAGT ATCAGCAGGG CGAGGCGTTC
ATCCAGGCAG TCGTGGCGGC GCGCGGCGCC CGCTTCGCCA ACCGTATCTG GGAAGGTCCG
GAATATCTGC CGACAATGGA GGAGATCCGC GCACCGCAGC GCTGGATCGC GCGCATGGGC
GGATGA
 
Protein sequence
MIRAAGSMPR PRMIDWLQAR NVGVAVSQSY LAPMIDRAAR QDQYRQLVQR SEPLIAAYMG 
VRLPRPVERI YVFDRAEWIE ANLSAFQSLF APLEELYDEI SARQGVVGLL MGQLNSQLLG
MQMGALIGFL ARRVLGQYDL GLLSPDPDLR GALYFVEPNI TRICAQLGLD GDDFRMWIAL
HETTHVFEFE AFPWVRDYFQ DLLRQFIGRV NDQAAMLSVG IVRLIERLLQ GQPIDRHWIE
LMLTPEQQAI FTRMQALMSV VEGYSNHIMN VIGGQLLPSY QQIEARVRQR QLRRPLIEEA
FNRLTGMDLK LAQYQQGEAF IQAVVAARGA RFANRIWEGP EYLPTMEEIR APQRWIARMG
G