Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1596 |
Symbol | |
ID | 5208551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1948201 |
End bp | 1948977 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640595202 |
Product | RDD domain-containing protein |
Protein accession | YP_001275938 |
Protein GI | 148655733 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCAT CAATGCAGAT TAATGACTAC ATCGTTGAGA CCCCAGAACA GATCGAACTG GCATACGATA TTGCCGGGAT CGGCTCGCGG TTTCTGGCGG CGATCATCGA CAGCGCGCTG ATCATCCTGG CAGAAGTGGC ATTGTTTCTT GCAGTCGCTC AGGTCGCTGG CATGCTCCAA TTTGCGGAGA GTGTGTGGCT TGCCATCGGA GCAACACTGG GGTTCGTCAT CCTCTGGGGA TACTATATCG CGTTCGAGTT GACATGGAAC GGGCAAAGTC CCGGTAAGCG CCTGATCGGG CTGCGGGTTG TAACCGAAGG GGGGCGCCCG ATGACCGTCC TTGGGTCGGT CATTCGGAAT CTGATCCGCA TTATCGACTT CCTGCCGTTG TTTTACGGCA TTGGCGTGAT TGCGATGTTT ATCGACGGGC GCGCACGGCG GTTGGGCGAT CTGGCAGCCG GTACGCTGGT GGTGCGTGAA CGCGCCGACG TGACGCTGGA AAGTCTCGTT GCCAACGTAG CGCCGGAGAC GCCGCTTCCG CCAGATGATA ATGATCTTGC CATCGATGCA GGTCTGTTGA CGCCCGACGA TTATGCGCTG TTGTGCGACT TTCTCGATCA GCGCCGCGAT CTGGCGCCAC CCGTGCGTCG GCAACTGGCG ATGCAGTTGG GCGAAGGGTT GCAGGTGCGA CTCGGTCTTC CGCCTGACGA TCCGGAACGG TTGATCGAGC GCGTCGTCCA TGCCTGCCGG CTGCGGCGCC TCGAAGAACG GCAGTAA
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Protein sequence | MSASMQINDY IVETPEQIEL AYDIAGIGSR FLAAIIDSAL IILAEVALFL AVAQVAGMLQ FAESVWLAIG ATLGFVILWG YYIAFELTWN GQSPGKRLIG LRVVTEGGRP MTVLGSVIRN LIRIIDFLPL FYGIGVIAMF IDGRARRLGD LAAGTLVVRE RADVTLESLV ANVAPETPLP PDDNDLAIDA GLLTPDDYAL LCDFLDQRRD LAPPVRRQLA MQLGEGLQVR LGLPPDDPER LIERVVHACR LRRLEERQ
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