| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1530 |
|---|
| Symbol | |
|---|
| ID | 5208485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 1870078 |
|---|
| End bp | 1871220 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640595137 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_001275873 |
|---|
| Protein GI | 148655668 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACATAC TCTGGCTCGA TGCCTTTCAC GGCGGTTCGC ACGCCGCTGT CTCACAGGGG
TTTGCGCGTC ATAGCCAGCA TGCGGTGACG CTTCTGACGC TGTCGCCAGC CGGCGGATGG
CGCTGGCGCA TGCGGGGAGC GGCGATCACC TTCGCGCGTG AGGTGCATCG TCGCTCCCTG
CCACCTGTTG ATCTTATCGT TGCCACCGAT ATGCTCGATG TGGCGACTTT CCTCGGACTG
ACGCGCGATC AACTGGTGAA TGTTCCCGTT GCGCTCTACA TGCACGAAAA TCAGTTGACC
TATCCCCTGC CGCCGGGTCG CACACGCGAC CTGGCGTTTC CGTGGATCAA CTACACATCC
GCTCTGGCCG CCGACGCGAT CTTTTTCAAC TCCGCCTTCC ACCGCGACTC CTTCTTTGCT
GCGTTGCCGG ATTTGCCGGG ACGGTACCAT GATCATCAGG AACGTGACCT GCTTGATGCA
CTTGCGGCGC GTGCGCGCGT TCTGCCGCCT GGAATCGATC TTGCCCGCCT GGATATGCCG
GACGCATCGG AGCGATTATC GGTTCATCAA ACGCCGACGC TGTTGTGGAA CAGTCGCTGG
GAGTATGATA AGGGACCCGA AACCTTCTTT GCCGCGCTAC GGGAGTTGAA GCGGCGCGCC
ATCGATTTCC GCGTGATCGT GCTTGGCGAA CATATCAATC CACGCCACCC GACATTTCTG
GCAGCGCGCG ACGAACTGGA GCGTTATGTG CTGGCATGGG GATACGCGCC CGATCTGGAA
ACCTATCGCC GGTTGCTCCA TCAGGCGGAT ATTGTCGTCA GCACTGCGAT CCAGGAGTTC
TTCGGCATTG CAGTCGTGGA AGCGATCTAT TGCGGGTGCG TACCGTTACT GCCAGATCGC
CTGAGTTACC CGGAATTGAT CCCCTCCCAC CTTCACCCAA CCTGTCTCTA CCGTGATGAT
GACCACCTGG CGGATCGTCT GTGCGAGATG ATCGCCATGC TGCCGGATCT GAAGCGCATC
GACTTCCGCG CTATCGTCGT CGGGTACGAC TGGTCGTGTA TGGCGGCGCG CTACGATGCC
GCGTTTGCCG ATGTCGTCAC CACGCGCGGC TATGGTGACT TCGCTGCAAA AACGCACCGC
TGA
|
|---|
| Protein sequence | MHILWLDAFH GGSHAAVSQG FARHSQHAVT LLTLSPAGGW RWRMRGAAIT FAREVHRRSL
PPVDLIVATD MLDVATFLGL TRDQLVNVPV ALYMHENQLT YPLPPGRTRD LAFPWINYTS
ALAADAIFFN SAFHRDSFFA ALPDLPGRYH DHQERDLLDA LAARARVLPP GIDLARLDMP
DASERLSVHQ TPTLLWNSRW EYDKGPETFF AALRELKRRA IDFRVIVLGE HINPRHPTFL
AARDELERYV LAWGYAPDLE TYRRLLHQAD IVVSTAIQEF FGIAVVEAIY CGCVPLLPDR
LSYPELIPSH LHPTCLYRDD DHLADRLCEM IAMLPDLKRI DFRAIVVGYD WSCMAARYDA
AFADVVTTRG YGDFAAKTHR
|
|---|
| |