| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1525 |
|---|
| Symbol | |
|---|
| ID | 5208480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 1861903 |
|---|
| End bp | 1862292 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640595132 |
|---|
| Product | glycine cleavage system H protein |
|---|
| Protein accession | YP_001275868 |
|---|
| Protein GI | 148655663 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0509] Glycine cleavage system H protein (lipoate-binding) |
|---|
| TIGRFAM ID | [TIGR00527] glycine cleavage system H protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.260803 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTCA AGACGCCAGC CGAACTGCAG TACAGCAAGA CGCATGAATG GATCCGGATC
GAAGGAGATG AGGCGACGGT CGGGATTACG GATTATGCGC AGGATGCCCT CGGTGACGTG
GTGTATGTCG ATCTGCCGCA AGTCGGTGCG CGTTTCGAGG CGGATGGCGT ATTCGGCGCT
GTCGAATCGG TCAAAGCGGC CTCCGATCTG TATCTGCCGG TTGCCGGTGA GATTATTGCC
GTGAATGAGG CGCTGGTGAA CAATCCTGAG TTGATCAACA AAGACCCATA CGGTGAGGGG
TGGATCGTGA AGATCAGGGT TGCTCCCGGC ATCGGTGCGT TGATGAGCGC AGATGCGTAT
GCAGCGTATG TGGATACGAT CAAGCATTGA
|
|---|
| Protein sequence | MAFKTPAELQ YSKTHEWIRI EGDEATVGIT DYAQDALGDV VYVDLPQVGA RFEADGVFGA
VESVKAASDL YLPVAGEIIA VNEALVNNPE LINKDPYGEG WIVKIRVAPG IGALMSADAY
AAYVDTIKH
|
|---|
| |