Gene RoseRS_1463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1463 
Symbol 
ID5208417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1777852 
End bp1779129 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content62% 
IMG OID640595072 
Productvon Willebrand factor, type A 
Protein accessionYP_001275809 
Protein GI148655604 
COG category[R] General function prediction only 
COG ID[COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.197313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.691375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCAG GCATCAACCT TCAACAGACT CTGAGCCGCA CAATGCTGGC AGTTGGCGAT 
GAGCCGCAGT TAGTCTACGT CTTGCTGGAA GCGCACGCTG AAGGGGTGGC GCAGCAACTG
CCAAAACTGC CGCTCAACCT GTGCCTGGTT CTCGACCGGA GTTCATCGAT GCGCGGCGAA
CGTCTGATGC AGGTCAAAGA AGCCGCCGCG CGGATCGTTG ATCAACTGGG ACCCGACGAT
TATTTTTCGC TGGTCGTGTT CAATGATCGC GCCGATGTCG TCATTCCTGC CCAGCGCGCC
ATCAAAAAAT CCGATCTGAA GGCGGCGATT GCGCAGATCG AAGCGGCTGG CGGCACGGAA
ATGGCGCAGG GTCTGGCGCT GGCGCTGCAA GAAGTGCAAC GCCCCTTCCT GACACGCGGG
ATCAGCCGGC TTATTCTGCT GACCGACGGA CGCACCTATG GCGATGAGAG TCGCTGTGTC
GAAATTGCGC GCCGTGGACA ATCGCGCGGC ATCGGATTGA CGGCGCTGGG GATCGGGACG
GAGTGGAATG AAGACCTGCT CGAAACAATG ACCGCCAGCG AAAACAGTCG CGCGCAGTAC
ATCGCCACCG CTCAGGATGT CGTCAAAGTG TTCGCCGATG AGGTGAAACG TCTGCATGCC
ATCTTTGCGC AACAGGTGCA CCTCTCGCTC GAAACACGCC CCGGCGCGCT GATCCGCTCG
CTCGATCAGG TGCGCCCCTT CATCGCGCCG ATCACGATTG TCGAGGAGGA AGAGCGCCGC
TGGGCCGCCA ATCTGGGAGA CTGGCCCGAT ACCGGTGTGC AGGGGTTTCT GATCGAGGTC
GTTGTGCCAG CGCTGCCAGT CGGGGACTAT CCGGTGCTGA AACTGACGCT GCGGTACCAC
CTGCCCGCCG CGAACCTGCG CGATCAGGTG CGTGAAGAAT TGATTCGCAT CAGCATGCGC
CCGGCTGCGG AAGTAACCCA TCGTGTCGAT GCAACCGTCA AGCACTGGCT GGAACGTCTG
GTAGCGTACC GGTTGCAGGC GAGCGCATGG AAGCACGCTG CCGAAGGACG GCTTGCAGAA
GCGAGTGAGC GCCTGCACAT GGCTGGCACG CGCATGCTCA ACGTTGGCGA TACTGCGCTG
GCGCATACGT TACAGCAGGA GGCGACGCGC ATCCTGCGCA GCGGCGCGGC GAGCGAAGAA
GGGCGCAAAC GCATCCGGTT CGGCACGCGC GGGCTGATCG GACCGGTTGC CAGCGATGAA
CGTGAGACCG GGACATGA
 
Protein sequence
MTPGINLQQT LSRTMLAVGD EPQLVYVLLE AHAEGVAQQL PKLPLNLCLV LDRSSSMRGE 
RLMQVKEAAA RIVDQLGPDD YFSLVVFNDR ADVVIPAQRA IKKSDLKAAI AQIEAAGGTE
MAQGLALALQ EVQRPFLTRG ISRLILLTDG RTYGDESRCV EIARRGQSRG IGLTALGIGT
EWNEDLLETM TASENSRAQY IATAQDVVKV FADEVKRLHA IFAQQVHLSL ETRPGALIRS
LDQVRPFIAP ITIVEEEERR WAANLGDWPD TGVQGFLIEV VVPALPVGDY PVLKLTLRYH
LPAANLRDQV REELIRISMR PAAEVTHRVD ATVKHWLERL VAYRLQASAW KHAAEGRLAE
ASERLHMAGT RMLNVGDTAL AHTLQQEATR ILRSGAASEE GRKRIRFGTR GLIGPVASDE
RETGT