Gene RoseRS_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1295 
Symbol 
ID5208247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1598016 
End bp1598741 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content59% 
IMG OID640594910 
ProductNUDIX hydrolase 
Protein accessionYP_001275649 
Protein GI148655444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.142759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTATC GTACAGCAGA CGTGGAAGGA GCGGTACAGG CGGTGGATAT CGCATACAAT 
AATGAGCCCT GGGCGGGTTG GATCTATCTT GTCCGTCAGG CGCTCAACAC CACCGTCTCC
CTGCCAGACG ATCAGTTGCT GCTGGTGCGC GATCTTGCCG GGCGCTCATT CCGCCCACGT
GAGCCAGCGC CGGGCGTCAT TCCACGGATT GGCGCCGTAT TGATCGCCCT CTACCCCGAT
GGCGCCGATC TGCGTCTGTT GTTGACCGTG CGGAGCAACC ATGTCGCCAG CCACCGGGGT
GAAGTGTCTC TGCCGGGAGG CGCCACTGAC CCGGACGATG CTGGACCGGT TACGACAGCA
TTGCGCGAAT GCGCAGAAGA ACTTGGCATC GCGCCTGATA CGGTGACAGT GCTTGGAACC
CTGACGCCAG TCTACATTCC GCCGAGCAAT TTTCGTATTA CACCGGTCGT GGGGGTGCTC
AATGCACCGC CACGCCTGAC GATCAACCAC GATGAAGTCG AGCGGGTCAT CACCGTTACC
CTGCGCGAAC TCCTCGACCC GGCGACAGTT ATGGTGGAAC ACTGGAAGTT GCACGGTCAC
GATGTGCTCG TGCCATTTTT TGCCATCGCC GGTTACAAAG TATGGGGCGC AACCGCGCTC
ATTCTCAGCG AACTTGTAGC CCGGATGCGA CACGCCAGAA TCGCGTATAA TGCAGAAGCA
TCCTGA
 
Protein sequence
MFYRTADVEG AVQAVDIAYN NEPWAGWIYL VRQALNTTVS LPDDQLLLVR DLAGRSFRPR 
EPAPGVIPRI GAVLIALYPD GADLRLLLTV RSNHVASHRG EVSLPGGATD PDDAGPVTTA
LRECAEELGI APDTVTVLGT LTPVYIPPSN FRITPVVGVL NAPPRLTINH DEVERVITVT
LRELLDPATV MVEHWKLHGH DVLVPFFAIA GYKVWGATAL ILSELVARMR HARIAYNAEA
S