Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1295 |
Symbol | |
ID | 5208247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1598016 |
End bp | 1598741 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640594910 |
Product | NUDIX hydrolase |
Protein accession | YP_001275649 |
Protein GI | 148655444 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.142759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTATC GTACAGCAGA CGTGGAAGGA GCGGTACAGG CGGTGGATAT CGCATACAAT AATGAGCCCT GGGCGGGTTG GATCTATCTT GTCCGTCAGG CGCTCAACAC CACCGTCTCC CTGCCAGACG ATCAGTTGCT GCTGGTGCGC GATCTTGCCG GGCGCTCATT CCGCCCACGT GAGCCAGCGC CGGGCGTCAT TCCACGGATT GGCGCCGTAT TGATCGCCCT CTACCCCGAT GGCGCCGATC TGCGTCTGTT GTTGACCGTG CGGAGCAACC ATGTCGCCAG CCACCGGGGT GAAGTGTCTC TGCCGGGAGG CGCCACTGAC CCGGACGATG CTGGACCGGT TACGACAGCA TTGCGCGAAT GCGCAGAAGA ACTTGGCATC GCGCCTGATA CGGTGACAGT GCTTGGAACC CTGACGCCAG TCTACATTCC GCCGAGCAAT TTTCGTATTA CACCGGTCGT GGGGGTGCTC AATGCACCGC CACGCCTGAC GATCAACCAC GATGAAGTCG AGCGGGTCAT CACCGTTACC CTGCGCGAAC TCCTCGACCC GGCGACAGTT ATGGTGGAAC ACTGGAAGTT GCACGGTCAC GATGTGCTCG TGCCATTTTT TGCCATCGCC GGTTACAAAG TATGGGGCGC AACCGCGCTC ATTCTCAGCG AACTTGTAGC CCGGATGCGA CACGCCAGAA TCGCGTATAA TGCAGAAGCA TCCTGA
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Protein sequence | MFYRTADVEG AVQAVDIAYN NEPWAGWIYL VRQALNTTVS LPDDQLLLVR DLAGRSFRPR EPAPGVIPRI GAVLIALYPD GADLRLLLTV RSNHVASHRG EVSLPGGATD PDDAGPVTTA LRECAEELGI APDTVTVLGT LTPVYIPPSN FRITPVVGVL NAPPRLTINH DEVERVITVT LRELLDPATV MVEHWKLHGH DVLVPFFAIA GYKVWGATAL ILSELVARMR HARIAYNAEA S
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