| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1246 |
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| Symbol | |
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| ID | 5208198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1529345 |
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| End bp | 1530718 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640594862 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_001275601 |
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| Protein GI | 148655396 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.300235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.840655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGA CCGCCATTCT GCTCGCTGCC GGCGCGGGGA CGCGCTTCTG GCCCTACAAT
GTCGTGCGCA ACAAATGCGC CTTTCCGATT GCGAATGTCC CAGCTGTGCG TCGCCTGTCC
GACGACCTTG CCGCGCTCGG CATCACCCGC CAGGTCGTCG TGGTCGGCGC AGGGGAAGCG
AGTGTGCGCG CCGCCCTGCG CGGCGCATCC GCCGACATTG CCTTTGTGCG CCAGGCGCAT
CCCGATGGCA CGGCTGCCGC TGCGTTCCTC GGCGCTGCCG GCATCGACGG CGATATCCTG
GTGGTTGCGG CGGATAGTGT GACCGACCGC GCCAACCTTG CGGCGCTGCG GGAACGGTTT
GAGCGCGACC GTCCCCTGGC GGCTGCGCTG ACGCAACCCC TCGGCGCCGA GTCCTCGCTC
GACTGGCTGA TCGCATATGT TGACGACGGG GAACTGCGCG GCGTCGAGGG GCACAGTCGC
GATGGCGACC GGCGCTTCTG CGGCGTGTAC GCCTTTCGTC CTGAAGCGTT GGCGTTTCTG
CGCGACAACC CGGCGCTGAT GCGCGTCGGC GTGGGTGGCA TGCCGCCCGT CGAAACCGAG
ATCGCGCAGT CGCTCCAGAT GATGGTCGAC GAAGGGGAAA CCGTTGCTGT CATCGACGCA
CCCGGCTTCC ACGTCGACCT TGACAAGCCG TGGCATATTC TCGAAGCGAA TGGACGGGTG
ATCGGCGCCA TGGCCGCTGC GTTGGAGGGG CATCAGATCG ACCCGACGGC GCGCGTCCAC
GATGGCGCCG ACATCGGCGG ACGCCTGGTG CTTGGACCGG GGGCAGTGAT CGGCAATCGC
GTGGTGGTGG ACGGCGACCT GTGGCTCGGC GCCGGCGCGA AGGCGCTCAA CGGCGCGATT
GTGCAGGGGC ACGCAGTTAT CGGGCAGGGA ACCGTCGTGC GCGACTACTG TCAGATCGGC
GGCGGCTCAT CGCTCGGAGC GCGCGGGGTC TACGGGCATG GCGCCGAATT CAGCGGCGTG
GCGCTCGATA CCGTCTACTG CTACCACTAC TGCGAAATCT GGGGCGTCGT CGGGCAGGCG
GTCGATTTCG GCGCGGCGAC GGTATGCGGC AACCTGCGCT TCGACGACCG CGACACCGTC
TGGCGCATCA AGGGGCGACC GGAGATTCCA ACAACTGCCG CCAATGCGGC ATACTTCGGC
GACTTCTGTC GCACCGGCGT CAACGCGATC ATCATGCCGG GGCGACGGCT CGGCGTCTAC
AGCATTTGCG GACCCGGAGT AATCCTGCAC GACGATCTCC CCGACCGCAC GATGATCATG
GTCGCGCAAC AGGTCACCAC GCGCCCCTGG GGACCGGAAC GCTACGGCTG GTAG
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| Protein sequence | MIQTAILLAA GAGTRFWPYN VVRNKCAFPI ANVPAVRRLS DDLAALGITR QVVVVGAGEA
SVRAALRGAS ADIAFVRQAH PDGTAAAAFL GAAGIDGDIL VVAADSVTDR ANLAALRERF
ERDRPLAAAL TQPLGAESSL DWLIAYVDDG ELRGVEGHSR DGDRRFCGVY AFRPEALAFL
RDNPALMRVG VGGMPPVETE IAQSLQMMVD EGETVAVIDA PGFHVDLDKP WHILEANGRV
IGAMAAALEG HQIDPTARVH DGADIGGRLV LGPGAVIGNR VVVDGDLWLG AGAKALNGAI
VQGHAVIGQG TVVRDYCQIG GGSSLGARGV YGHGAEFSGV ALDTVYCYHY CEIWGVVGQA
VDFGAATVCG NLRFDDRDTV WRIKGRPEIP TTAANAAYFG DFCRTGVNAI IMPGRRLGVY
SICGPGVILH DDLPDRTMIM VAQQVTTRPW GPERYGW
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