Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1236 |
Symbol | |
ID | 5208188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1516417 |
End bp | 1517349 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640594852 |
Product | ABC transporter related |
Protein accession | YP_001275591 |
Protein GI | 148655386 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.143778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGACT ATGTGATCGA AACAAGCGGT CTGCGCAAGG TGTACGGCGC AAAAGTCGCC GTTGCCGACC TGACGCTTCA GGTGCCGCGC GGCGAGGTGT TTGCCTTCCT GGGACCGAAC GGCGCCGGCA AGAGCACGGC GGTCAAGATG CTGCTGGGGT TGGTGAAGCC AACGAGCGGC ACGGCGCAGG TACTGGGCGC CGCTCCCGCC GACCCGCGTG CGATGGCGCG GATCGGCTTT CTGCCGGAGC ACTTCCGGTT TCACGAATGG TTACAGGCTG CTGAGTTTCT CGACCTGCAC GCACGCCTGA GCGGGATGTC GGCTGACGCG CGGCGGCGGC GCATTCCCGA TGTGCTGGCG CTCGTCGGCT TGTCTGAGCA TGCGCGGCGT CCGCTCGCCG ATTTCTCCAA AGGCATGCTT CAGCGCATCG GTCTGGCACA GGCGCTGATT CACGATCCGG AACTGGTGTT TCTCGATGAG CCGACCTCGG CGCTCGACCC GTTCGGGCGA ATGCTGGTGC GCGGCATTAT CCGCGATCTG CGCGCGCGCG GCACGACAGT CTTCCTCAAC TCCCATCTGC TCGGCGAGGT CGAAATGACC TGTGACCGGG CGGCATTCAT CCGCGCGGGG CGGGTGCTCC GCACCCTGAA CCTGCACGAA TCGGCAGCAG GTAGAGTGCG AGTTGCGTTG CGTGTGGCAG GAGCATCGAA CGGGCTGATC GAGTCACTGA GTGTGTTCTG CGCTGATGGA CAGGCGCCAC ATGAGACATC TCCCGGCATA ATCGAACTGG AAGTCGCCAG TGAGGATGTG TTGCCGCAGA TTGCGGAGCG AATCATTGCC AGCGGTGCGC GCCTCTATGC CCTGACCCCC CAGCGTGTCT CCCTCGAACA ACTCTTCCTC GACATCGTTG GTCGCGATGA CAGCGGTCAA TGA
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Protein sequence | MPDYVIETSG LRKVYGAKVA VADLTLQVPR GEVFAFLGPN GAGKSTAVKM LLGLVKPTSG TAQVLGAAPA DPRAMARIGF LPEHFRFHEW LQAAEFLDLH ARLSGMSADA RRRRIPDVLA LVGLSEHARR PLADFSKGML QRIGLAQALI HDPELVFLDE PTSALDPFGR MLVRGIIRDL RARGTTVFLN SHLLGEVEMT CDRAAFIRAG RVLRTLNLHE SAAGRVRVAL RVAGASNGLI ESLSVFCADG QAPHETSPGI IELEVASEDV LPQIAERIIA SGARLYALTP QRVSLEQLFL DIVGRDDSGQ
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