Gene RoseRS_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1217 
Symbol 
ID5208169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1496310 
End bp1497254 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content68% 
IMG OID640594835 
Producthypothetical protein 
Protein accessionYP_001275574 
Protein GI148655369 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.782404 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCA CCACGCCACA ACCGGTTCCC CTCACTGACG CCGACGCCGA CCCGTTCCGC 
TACGGGTGGC GTCTCGTGCC GCGTCCCACC CCCGATAATC CCCATCACCT CGAACAGGTG
CCGCTTACTC TTGACGACGT GCTCCATCCT GAAGTGGGAG ACTTCATTGT GCACAGCGAT
CGCCACGAGA CCGACCGGAT GTACCTCACC GCTGTGCTGC GCGCGCGCCT GGAGCCGTCC
CGTCGGGCGA TTGTGCTCAG CGACGTGCGC ATTGCGTGGG ACCTCCCCGA CCTGCGCGCA
CACGGACCGG ACGTGATGGT CATCCCCGGC GTGCGCAAAC GGCGCAACTG GAGCACGTTT
GAGGTGGCGG TCGAACGGGC GCGCCCGGCG CTGATCATTG AGATCGTCTC GCTGGATGCG
CGTGAGAACG ATGTGGTGAT CAAGGTGGAG CAGTACGCGC GGGCGGGAGT GGCGCAGTAC
GTGATTGTGG ACGATACGGG GCGAGGCGGG ACGCGACGGT TGCGTCTGCT CGACTATCGC
CTGGAAGGTA CGGCGTACCG GTTGCAGGCG CCGGACGCCG ACGGGCGGGT GCATCTGGCG
ATTGCCGACG TATGGCTCGG AATACGGCGC GACCACGTGG TCTGCTATGA CGCGGCGGGG
CGGGAGATCG GGGACTATGT GACGGTGGTG CGGCAGGCGG CGAAGGCGGA AGCGCGGGCG
AAGCAGGCGG CGGTGCGGGC GAAAGAAGCG GCAGCACGGG CGCGGCAGGA AGCAAGAGCG
CGGGAAGCCG AAGCGCGCGC ACGGGTGGAG GCGGAGGCGC GCGCGCGGCA GGAAGCCGAA
GCGCGGGAAG CCGAAGCACG GGCGCGGGCG GAAGCCGAAG CGCGTCTGCG CGCGCTACGC
GAGCGTCTGC GAGCGCTGGG AATTGAACCA GACGATGCAT TGTGA
 
Protein sequence
MTTTTPQPVP LTDADADPFR YGWRLVPRPT PDNPHHLEQV PLTLDDVLHP EVGDFIVHSD 
RHETDRMYLT AVLRARLEPS RRAIVLSDVR IAWDLPDLRA HGPDVMVIPG VRKRRNWSTF
EVAVERARPA LIIEIVSLDA RENDVVIKVE QYARAGVAQY VIVDDTGRGG TRRLRLLDYR
LEGTAYRLQA PDADGRVHLA IADVWLGIRR DHVVCYDAAG REIGDYVTVV RQAAKAEARA
KQAAVRAKEA AARARQEARA REAEARARVE AEARARQEAE AREAEARARA EAEARLRALR
ERLRALGIEP DDAL