| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1203 |
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| Symbol | |
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| ID | 5208155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1474342 |
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| End bp | 1477248 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640594821 |
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| Product | hypothetical protein |
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| Protein accession | YP_001275560 |
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| Protein GI | 148655355 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.43548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGTC AACTCACGAT TGCCCTCTCG TTTCCCCCGG TCATCTGGCG ACGGTTGCTG
AGTCACTTTG GGCTTGCGCT GGCGGTCTGG TCTGGCATGA CGCTGGCAGC TGGCATGGTG
GTCAGCATTC CGGTCTACGC CGAAGCGTCG GGGTACCGCA TTTTGCTGGC GGCGCTCACC
GAACGCGCAG TCGCCGACCC GCTGCCGCCA TTCGCCATGG TCTATCGCTA CGGCGGTGCG
TCCGATCCAT CGATTTCGTG GCAACAGTAC CTGCTGACGG ATCAACTGGC GGGCAATCTG
CCAGCGGCGG GGATTGACCT GCCTGCACCG CCGGGCGTGC GCTTCGCCGC CACCGAAAAA
CTGCGTGTCG GGTTTCCCGA CGGTGCAGGG CGGGAAGTTC TGTTTGCCCG TATCGGCTTC
CTCAGCGGCA TCGAACGGCA TATCCAGATT GTTGATGGCG ATCTGCCGCG TCCCTTCACC
GGCGACGGAC CGCTCGACGT GCTGGTTTCA GAAACAACCG CTGCGAAGAA CACGCTGCTG
ATCGATGATC TCTACCGGGT CGAGTCGACC GGTCGCGGAC CGCGCATCGA TGTGCTGGTG
CGGATCGCAG GCATCTGGCG ACCGGCGGAT GCCGACGCCG GTTACTGGTT TCAGCCGCCA
TCGACGTATA GCGATGTCTT CCTTGTGCCC GAGGAAAGTT TTGCCCTGAT TGCGGATGTG
CCGGATGCGC GATTTGTGAC ATTGGCGGCG TGGTACACGG CGATCGATGG CAGCAGTGTG
CGCAGCAGCG ATGTCGAGCG TCTGCGTGAG CGAATTGCAA CCGCCACCGC CGACATCCAG
CAGCGTCTGC CCGGCGCGCA ACTCGTGCGC TCGCCAATGG AGGCGCTAGA GCGGCATCGT
GATCAGGTGC GGGTGTTGAC TGTCACGCTG GCGCTGTTTG CAGTGCCATT GCTCGTCGTG
ATCGGGTACT TTGTGCTCCA GGTCGCCGGG ATGACCGTTG CGCGCCAGCA GCAGGAGATG
GCGATTCTGC GCAGTCGCGG CAGTTCGCGC TGGCAGGTGC TGGGGCTGGC GCTCGGCGAA
GTGCTGCTGC TCGGCGCAGC GGCATGGGCG GCTGGTTTGC CGTTGGGGTT GTTGCTGGCG
CATGTGATCT CCTGGACTGT CTCCTTTTTG CGGTTTGCGC CACTTGACGC GCCGGCGCCG
ACATTGTTGC CGGCAAGCCC CTGGCATGCA CTGGCGACGG TTCTGCTGGC GCTGCCAGCC
GTTGTGATCC CGGCGCTGAG CGCTGCCGGT CGGACGATCA TTTCCTACAA GATCGAACGC
GCGCGCGCAA CCCGCCCACC GCTCTGGCAA CGTCTCTATC TCGATATTCT GTTGTTGATA
CCGGCAGTCT ATGGTTATCA ACAGTTACGG TTGAGCGGTA TGATCGGTGT GCCGGGCGTG
ACTGTCGGCA CGGATGACCC CTTTCGCAAC CCGCTGTTGC TGCTCGCTCC GGCGCTGATG
GTGTTTGCCG GCACGCTGGT CGGTATGCGT TTCCTACCGC TGCTGCTGCG CGCGCTGGCA
TGGATTGCGG GGCTGTTGCC GGGAGTGGCG CTTGTGACGG CGCTGCGCTT CCTGTCGCGC
ACGCCGGGCG CCTATGGCGG ACCGGCGCTG CTCGTTGCGC TGACCCTGGC GCTTGCAACA
TTCACATCGT CGATGGCGCT CACACTGGAT CGTCATAGTG AAGAACGGGC GTACTATCGA
GGCGCGGCGG ATGTGCGTCT CGTATATCCT GGCGCGGCGA TAACATCGGC AAACATTGCT
GGCGATCGCG AGATCGCCCC GGCGGAAACC AGTCTTGATC TGAGCGGAGG CACGCTGGGC
ACAACGGGCG AAGCCGATAC GACACCCAGC ACGGCGTACC TGTTCGTGCC GATCGAAGAG
TATCTGCTGA TCCCCGGCGT GACCGGCGCC ACCCGCGTTG CGCCTGGCAA GGTAGACATT
ATCGTGGGGA GCGCGCGACC AATCAGCGGC ATTTTCTACG GCGTTGATCG GACGACCCTG
GCAGCAGTGC TGGCGGATGC GTGGCGACCT GACTATGCCG ATGAGTCCCT CGGCGCGTTG
ATGAACCGTC TGGCGGATTA TCCCGATGCG GCGCTGGTTT CTGAAACATT CGCAACACAA
CAAGGGCTGC GGATCGGCGA CCGGTTTACG CTGGCGATGA ATGATCGCGG GCAGACGCAA
AATATCACAT TTACGGTCGT TGGTATGCTC AGGTATTTTC CAACGCTCTA CGATCAGGGT
CCGCCATTTG TGATCGGGAA CCTGGACTAC AGTTTCGATT CACAGGGCGG GCTGTATCCG
TATGAAGTCT GGCTATCGCT GGCGCCCGAC GCCAGTCTGC AAGCAGTGGC GGCGGCAGGC
ATCGGGTACG GGCTGCGCAT GATCCGCTCG ACGCCGCAGA CGTTGCTCGA TCTCGATCTG
CGCCGACCGG AGCGACAGGG GTTGTTCGGG TTGCTCTCGG TCGGTTTTCT GGCGACAACT
GTGGTGACGG TGATTGGATT TGTCGCCTAT ACGCTTCTCT CGTTCCAGCG TCGCCTGGTG
GAGTTGGGAG TCCTGCGCGC AATTGGCTTG AGTACGCGAC AGTTGAGCGT GCTGCTGGTC
TTTGAGCAGA CGCTGATCGT CGGTTTTGGC GCCGCTCCCG GCACGCTGGT CGGTATTCTG
ACAAGTTGGT TGTTTATTCC ATTCTTGCAG GTGCGTACCG GGGTCTATCC TGAGACGCCA
CCATTCGTGG TGCAGATCGA CTGGGAGCGG ATCGCGCTGG TGTACGGTAT TTCCGGCGGT
TTGCTGGCAG CGACGATTGT TGTGATCGTG CTCTTGTTGC ATCGAATGCG CATTTTCGAG
GCGGTGAAAC TGGGTGAAGC GGTATAG
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| Protein sequence | MLRQLTIALS FPPVIWRRLL SHFGLALAVW SGMTLAAGMV VSIPVYAEAS GYRILLAALT
ERAVADPLPP FAMVYRYGGA SDPSISWQQY LLTDQLAGNL PAAGIDLPAP PGVRFAATEK
LRVGFPDGAG REVLFARIGF LSGIERHIQI VDGDLPRPFT GDGPLDVLVS ETTAAKNTLL
IDDLYRVEST GRGPRIDVLV RIAGIWRPAD ADAGYWFQPP STYSDVFLVP EESFALIADV
PDARFVTLAA WYTAIDGSSV RSSDVERLRE RIATATADIQ QRLPGAQLVR SPMEALERHR
DQVRVLTVTL ALFAVPLLVV IGYFVLQVAG MTVARQQQEM AILRSRGSSR WQVLGLALGE
VLLLGAAAWA AGLPLGLLLA HVISWTVSFL RFAPLDAPAP TLLPASPWHA LATVLLALPA
VVIPALSAAG RTIISYKIER ARATRPPLWQ RLYLDILLLI PAVYGYQQLR LSGMIGVPGV
TVGTDDPFRN PLLLLAPALM VFAGTLVGMR FLPLLLRALA WIAGLLPGVA LVTALRFLSR
TPGAYGGPAL LVALTLALAT FTSSMALTLD RHSEERAYYR GAADVRLVYP GAAITSANIA
GDREIAPAET SLDLSGGTLG TTGEADTTPS TAYLFVPIEE YLLIPGVTGA TRVAPGKVDI
IVGSARPISG IFYGVDRTTL AAVLADAWRP DYADESLGAL MNRLADYPDA ALVSETFATQ
QGLRIGDRFT LAMNDRGQTQ NITFTVVGML RYFPTLYDQG PPFVIGNLDY SFDSQGGLYP
YEVWLSLAPD ASLQAVAAAG IGYGLRMIRS TPQTLLDLDL RRPERQGLFG LLSVGFLATT
VVTVIGFVAY TLLSFQRRLV ELGVLRAIGL STRQLSVLLV FEQTLIVGFG AAPGTLVGIL
TSWLFIPFLQ VRTGVYPETP PFVVQIDWER IALVYGISGG LLAATIVVIV LLLHRMRIFE
AVKLGEAV
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