| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1156 |
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| Symbol | |
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| ID | 5208107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1439661 |
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| End bp | 1440473 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640594773 |
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| Product | tRNA pseudouridine synthase ACD |
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| Protein accession | YP_001275513 |
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| Protein GI | 148655308 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.133341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0146408 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAACA TTGCGCTGCG GATCGAGTAT GACGGCGCCG ACTTTGTCGG CTCTCAGTGG
CAAACGAATG GCCGCTCGGT CCAGGGGGTG CTTGAGGCTG CCTGGCAACA ACTGACTGGC
GAGCGCCGCC GGATGACGCT GGCTGGACGT ACCGATGCCG GGGTGCATGC CCGTGGACAG
GTGGCGAATG TCCGAACCGA TACCCGCCAT ACAATATCCA CGATTGTGCG GGGGTTGAAC
GGCATTCTCC CGGAAGATGT CGGCGTCCTT GCCGCCTGGG AAGCGCCCGA TGATTTTCAT
GCACGCTACT CGGCAGTACG TCGCGAGTAT CGCTACGTCA TCGACAATGG TCGCACGCCC
TCACCGCTGC TGCGCCGCCA CGCGGCATAT GTGCCGCGCC GCCTCGATAC AGCCGCAATG
GACGCTGTAG TGAGGCAGGT GATCGGAACA CACGATTTCG CGCCGCTGAG CGACGGACCG
CAGGAAGGAT CGACGGTGCG GATCTGCTAC GAGGCGCGCT GCACGCGCAC TGAAGTGTGG
GGACAACCGC TGGTGCTGAT CGATATTGCG GCGAATGCGT TCCTCCGCCA TATGGTGCGG
AATCTGGTCG GGACGCTTAT TCAGGTCGGC GAAGGGCGAA TCGACGCCGA CCGGTTTGCA
GCAGTGCTGG CAGGTGATGA CCGACGCGCC AGAGTGCTGG CGCCAGCCCA TGGTCTCTAC
CTGATGGCAG TGCGCTATCC GGAAGATGGA ACGGGTGCGG CGGACGAACC TGCTGCACCG
CATGGAGTGA CCGAGACAAG GATGCAACTA TGA
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| Protein sequence | MRNIALRIEY DGADFVGSQW QTNGRSVQGV LEAAWQQLTG ERRRMTLAGR TDAGVHARGQ
VANVRTDTRH TISTIVRGLN GILPEDVGVL AAWEAPDDFH ARYSAVRREY RYVIDNGRTP
SPLLRRHAAY VPRRLDTAAM DAVVRQVIGT HDFAPLSDGP QEGSTVRICY EARCTRTEVW
GQPLVLIDIA ANAFLRHMVR NLVGTLIQVG EGRIDADRFA AVLAGDDRRA RVLAPAHGLY
LMAVRYPEDG TGAADEPAAP HGVTETRMQL
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