Gene RoseRS_1152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1152 
Symbol 
ID5208103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1436955 
End bp1437920 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content59% 
IMG OID640594769 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001275509 
Protein GI148655304 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.489043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0056375 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAGACA TCCATCAGGT TCAGTTGCCA TTGCCATTCC CATTGCGAAT CGTGAACGCC 
TACCTGATGC GTGATGACGA TGGATGGACC ATCATCGACG CCGGACTCAA TTATCCGCCA
GGTCGGGCGG CGTGGCGCGA AGCATTCAAC CGCTACGGCG TCGATCCGGC ATCGATCCGG
CGCATTGTGC TGACCCACGC GCATCCCGAT CACTATGGCA TGGCAGGCTG GCTCCAGAGC
CTGTCGGGTG CATCTGTGGC GCTTTCAGCA GGCGAAGCGG CATTTGCCCG GGCGCAGTGG
CACAGCGACT CACGCGCCCA CGAGATAACC GCCACATTCT TTGGTGCGCA CGGAATGCCG
CGCGATCTGA TGGCAACAGT AACGGAAGAT ATTGTCAACC TGCGCTTGAT GACCCATCCA
ACGCCGGTCG TCTTAACCCA CCTTCCGGCT GGTGAACCAT TGACGATCGG CAGGCGCGTG
TTCGTGCCGG TTGCGACACC TGGACACAGC GACGACCATC TGGTGTTCTA CTGCGCTGAA
GAACGCCTGT TGATCTGTGG CGATGCAGTG CTGATCAAAA TTACGCCCAA CGTTGGGCTG
TGGGGATGGA CGCATGGCAA TCCGCTGGCA CAGTTTCTCG CATCGCTCGA CCGCCTGGCG
GAACTCGACG TGGCGCTGGC ATTGCCGGGA CACGGACCGC CGATCACGCG CTTCCACGAA
CGCCTTGAAG AACTGCGTAT CCATCACGCC GAGCGTCTGG CAGCTATGGA ACGCGCCGTT
GGCGCAGGAG CGACTGCATA CGATGTATGC ACAGCGGTGT TTCCGCTCCA GGAACTCACA
TCACACCAGA TGCGCTTTGC TATGGCGGAA ACGCTGGCAC ACCTGGAATA TCTGGCAACG
CAGGGACGCA TTGAACAGAT CGAACATGAT GGCGGACAGT ACTCCTGGCG ACGATGCACC
TGCTGA
 
Protein sequence
MEDIHQVQLP LPFPLRIVNA YLMRDDDGWT IIDAGLNYPP GRAAWREAFN RYGVDPASIR 
RIVLTHAHPD HYGMAGWLQS LSGASVALSA GEAAFARAQW HSDSRAHEIT ATFFGAHGMP
RDLMATVTED IVNLRLMTHP TPVVLTHLPA GEPLTIGRRV FVPVATPGHS DDHLVFYCAE
ERLLICGDAV LIKITPNVGL WGWTHGNPLA QFLASLDRLA ELDVALALPG HGPPITRFHE
RLEELRIHHA ERLAAMERAV GAGATAYDVC TAVFPLQELT SHQMRFAMAE TLAHLEYLAT
QGRIEQIEHD GGQYSWRRCT C