Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1152 |
Symbol | |
ID | 5208103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1436955 |
End bp | 1437920 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640594769 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001275509 |
Protein GI | 148655304 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.489043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0056375 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAGACA TCCATCAGGT TCAGTTGCCA TTGCCATTCC CATTGCGAAT CGTGAACGCC TACCTGATGC GTGATGACGA TGGATGGACC ATCATCGACG CCGGACTCAA TTATCCGCCA GGTCGGGCGG CGTGGCGCGA AGCATTCAAC CGCTACGGCG TCGATCCGGC ATCGATCCGG CGCATTGTGC TGACCCACGC GCATCCCGAT CACTATGGCA TGGCAGGCTG GCTCCAGAGC CTGTCGGGTG CATCTGTGGC GCTTTCAGCA GGCGAAGCGG CATTTGCCCG GGCGCAGTGG CACAGCGACT CACGCGCCCA CGAGATAACC GCCACATTCT TTGGTGCGCA CGGAATGCCG CGCGATCTGA TGGCAACAGT AACGGAAGAT ATTGTCAACC TGCGCTTGAT GACCCATCCA ACGCCGGTCG TCTTAACCCA CCTTCCGGCT GGTGAACCAT TGACGATCGG CAGGCGCGTG TTCGTGCCGG TTGCGACACC TGGACACAGC GACGACCATC TGGTGTTCTA CTGCGCTGAA GAACGCCTGT TGATCTGTGG CGATGCAGTG CTGATCAAAA TTACGCCCAA CGTTGGGCTG TGGGGATGGA CGCATGGCAA TCCGCTGGCA CAGTTTCTCG CATCGCTCGA CCGCCTGGCG GAACTCGACG TGGCGCTGGC ATTGCCGGGA CACGGACCGC CGATCACGCG CTTCCACGAA CGCCTTGAAG AACTGCGTAT CCATCACGCC GAGCGTCTGG CAGCTATGGA ACGCGCCGTT GGCGCAGGAG CGACTGCATA CGATGTATGC ACAGCGGTGT TTCCGCTCCA GGAACTCACA TCACACCAGA TGCGCTTTGC TATGGCGGAA ACGCTGGCAC ACCTGGAATA TCTGGCAACG CAGGGACGCA TTGAACAGAT CGAACATGAT GGCGGACAGT ACTCCTGGCG ACGATGCACC TGCTGA
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Protein sequence | MEDIHQVQLP LPFPLRIVNA YLMRDDDGWT IIDAGLNYPP GRAAWREAFN RYGVDPASIR RIVLTHAHPD HYGMAGWLQS LSGASVALSA GEAAFARAQW HSDSRAHEIT ATFFGAHGMP RDLMATVTED IVNLRLMTHP TPVVLTHLPA GEPLTIGRRV FVPVATPGHS DDHLVFYCAE ERLLICGDAV LIKITPNVGL WGWTHGNPLA QFLASLDRLA ELDVALALPG HGPPITRFHE RLEELRIHHA ERLAAMERAV GAGATAYDVC TAVFPLQELT SHQMRFAMAE TLAHLEYLAT QGRIEQIEHD GGQYSWRRCT C
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