Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1080 |
Symbol | |
ID | 5208027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1343643 |
End bp | 1345241 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640594694 |
Product | hypothetical protein |
Protein accession | YP_001275438 |
Protein GI | 148655233 |
COG category | [S] Function unknown |
COG ID | [COG2326] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGAAC AGGTCGATCT GACGCTCACG CTCAGCAAAC GCGACTATCG CCAGCGCCTC GTCGATCTCC AGACACGCCT GTACGATATG GAACAGGCAT TGTTCGAGGC GCGCATCCCG GCGCTGTTTG TGTTCGAAGG GTGGGCTGGC GCCGCCAAGG TGCGCACGAT CAGCGTCATT ACCCGCCGCC TCGATCCGCG CGGGTTGCGG GTCTACCCGA TTACGCCGCC GCGCACCTAC GAGATGCAGT ATCCCTGGCT CTATCGCTTC TGGCTGAAGA CTCCCAGTTA CGGTCAGATT GCGATTTTCG ACCGCTCCTG GTACCGTCAG GTACTGGGTG AGCGGGTGCG CAATGTGTTG AACGTCGCCG ACTGGCGCGC GCGGTGCGAG GACATTGCGG CGTTCGAGCG GCAACTGTCG GACGATGGCG CCGTGATCTT GAAGTTCTGG CTGCACATTT CGCAGCGTGA ACAGGGGCGA CGGTTCAAAA AACTGCTCGG TGACAAAACG ACCGCCTGGC AGGTGACGGA GGAAGACCTG TGGCAGCATC GCCACTACGA ACGGGTGCGT GATGTGGTCG AAGACATGAT CGCGCGCACT GACACTCCGT ATGCGCCCTG GATCATTATT CCGGCAACGT GTGGGCACTA TGCGCGCGTG GCGGCATTCG AGGCGATCCT GAGCGCGCTC GAGGCGCGCA TCGGGCGTCG TCCGGTGGTT GGTGTGGATG CCGAAGCGCG CGAAGAACTG CTCGACTCGC GCGGCACATC CTTCCGTCGC AGCCTCGATG TGTTGCGCAC GCGCGGCGCT CGCCCGACAA CAATGGCGCT TCCGGGCGAC GGCGCGGCTG CAACGCCCCC ACTGCCAATC GGCGTCAGCA TTCTGCGACG AGTCGATCTG AGCCAGCGTC TTGATCCTGG AAAGTACAGC CGTCAACTCA ACAAATTGCA AGCCAAACTG CGCCTCCTTG GCTTTCAGGT CTATCTGCAG AAGCGTCCGG TTGTGGTTGT CTTCGAGGGG TGGGACGCCG CCGGGAAGGG TGGAACCATT CAGCGCATCA CCGAGAAACT CGACCCGCGC AGTTATGTGG TGCACGCGAT TGCTGCGCCG ACCGGCGAAG ACAAAGCGCA CCATTATCTC TACCGTTTCT GGCGACGCTT GCCGCCGCGT GGACAGATCG CCATCTTTGA TCGCTCGTGG TATGGGCGGG TGCTGGTCGA GCGTGTCGAA GGGTTTGCGC GCCCGGAGGA GTGGCAGCGC GCATACGCCG AAATCAACGA GTTCGAGCGC CAGCTGGTCG AGTTTGGTAC AATTGTTGTG AAGTTCTGGA TGCATCTCAG CCCGGAAGAG CAGTTGCGGC GTTTCGAGGA GCGACAGTCG ATCCCGTACA AAGCCTGGAA ACTGACCGAA GAGGACTGGC GCAACCGCGA GAAATGGCCG CAGTATGAGG TGGCGGCAGA CGAGATGCTT CTGCGCACCT CGACGCCAGC TGCGCCATGG ACGATCATTG AAGCCGAGGA TAAGCGATTT GCGCGGATCA AGGCGTTGCG CACGCTGGTG CGTCGCCTGG AAGCGGAGTT GGGTCGGGTG AAACTGTAG
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Protein sequence | MLEQVDLTLT LSKRDYRQRL VDLQTRLYDM EQALFEARIP ALFVFEGWAG AAKVRTISVI TRRLDPRGLR VYPITPPRTY EMQYPWLYRF WLKTPSYGQI AIFDRSWYRQ VLGERVRNVL NVADWRARCE DIAAFERQLS DDGAVILKFW LHISQREQGR RFKKLLGDKT TAWQVTEEDL WQHRHYERVR DVVEDMIART DTPYAPWIII PATCGHYARV AAFEAILSAL EARIGRRPVV GVDAEAREEL LDSRGTSFRR SLDVLRTRGA RPTTMALPGD GAAATPPLPI GVSILRRVDL SQRLDPGKYS RQLNKLQAKL RLLGFQVYLQ KRPVVVVFEG WDAAGKGGTI QRITEKLDPR SYVVHAIAAP TGEDKAHHYL YRFWRRLPPR GQIAIFDRSW YGRVLVERVE GFARPEEWQR AYAEINEFER QLVEFGTIVV KFWMHLSPEE QLRRFEERQS IPYKAWKLTE EDWRNREKWP QYEVAADEML LRTSTPAAPW TIIEAEDKRF ARIKALRTLV RRLEAELGRV KL
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