Gene RoseRS_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1080 
Symbol 
ID5208027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1343643 
End bp1345241 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content61% 
IMG OID640594694 
Producthypothetical protein 
Protein accessionYP_001275438 
Protein GI148655233 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAC AGGTCGATCT GACGCTCACG CTCAGCAAAC GCGACTATCG CCAGCGCCTC 
GTCGATCTCC AGACACGCCT GTACGATATG GAACAGGCAT TGTTCGAGGC GCGCATCCCG
GCGCTGTTTG TGTTCGAAGG GTGGGCTGGC GCCGCCAAGG TGCGCACGAT CAGCGTCATT
ACCCGCCGCC TCGATCCGCG CGGGTTGCGG GTCTACCCGA TTACGCCGCC GCGCACCTAC
GAGATGCAGT ATCCCTGGCT CTATCGCTTC TGGCTGAAGA CTCCCAGTTA CGGTCAGATT
GCGATTTTCG ACCGCTCCTG GTACCGTCAG GTACTGGGTG AGCGGGTGCG CAATGTGTTG
AACGTCGCCG ACTGGCGCGC GCGGTGCGAG GACATTGCGG CGTTCGAGCG GCAACTGTCG
GACGATGGCG CCGTGATCTT GAAGTTCTGG CTGCACATTT CGCAGCGTGA ACAGGGGCGA
CGGTTCAAAA AACTGCTCGG TGACAAAACG ACCGCCTGGC AGGTGACGGA GGAAGACCTG
TGGCAGCATC GCCACTACGA ACGGGTGCGT GATGTGGTCG AAGACATGAT CGCGCGCACT
GACACTCCGT ATGCGCCCTG GATCATTATT CCGGCAACGT GTGGGCACTA TGCGCGCGTG
GCGGCATTCG AGGCGATCCT GAGCGCGCTC GAGGCGCGCA TCGGGCGTCG TCCGGTGGTT
GGTGTGGATG CCGAAGCGCG CGAAGAACTG CTCGACTCGC GCGGCACATC CTTCCGTCGC
AGCCTCGATG TGTTGCGCAC GCGCGGCGCT CGCCCGACAA CAATGGCGCT TCCGGGCGAC
GGCGCGGCTG CAACGCCCCC ACTGCCAATC GGCGTCAGCA TTCTGCGACG AGTCGATCTG
AGCCAGCGTC TTGATCCTGG AAAGTACAGC CGTCAACTCA ACAAATTGCA AGCCAAACTG
CGCCTCCTTG GCTTTCAGGT CTATCTGCAG AAGCGTCCGG TTGTGGTTGT CTTCGAGGGG
TGGGACGCCG CCGGGAAGGG TGGAACCATT CAGCGCATCA CCGAGAAACT CGACCCGCGC
AGTTATGTGG TGCACGCGAT TGCTGCGCCG ACCGGCGAAG ACAAAGCGCA CCATTATCTC
TACCGTTTCT GGCGACGCTT GCCGCCGCGT GGACAGATCG CCATCTTTGA TCGCTCGTGG
TATGGGCGGG TGCTGGTCGA GCGTGTCGAA GGGTTTGCGC GCCCGGAGGA GTGGCAGCGC
GCATACGCCG AAATCAACGA GTTCGAGCGC CAGCTGGTCG AGTTTGGTAC AATTGTTGTG
AAGTTCTGGA TGCATCTCAG CCCGGAAGAG CAGTTGCGGC GTTTCGAGGA GCGACAGTCG
ATCCCGTACA AAGCCTGGAA ACTGACCGAA GAGGACTGGC GCAACCGCGA GAAATGGCCG
CAGTATGAGG TGGCGGCAGA CGAGATGCTT CTGCGCACCT CGACGCCAGC TGCGCCATGG
ACGATCATTG AAGCCGAGGA TAAGCGATTT GCGCGGATCA AGGCGTTGCG CACGCTGGTG
CGTCGCCTGG AAGCGGAGTT GGGTCGGGTG AAACTGTAG
 
Protein sequence
MLEQVDLTLT LSKRDYRQRL VDLQTRLYDM EQALFEARIP ALFVFEGWAG AAKVRTISVI 
TRRLDPRGLR VYPITPPRTY EMQYPWLYRF WLKTPSYGQI AIFDRSWYRQ VLGERVRNVL
NVADWRARCE DIAAFERQLS DDGAVILKFW LHISQREQGR RFKKLLGDKT TAWQVTEEDL
WQHRHYERVR DVVEDMIART DTPYAPWIII PATCGHYARV AAFEAILSAL EARIGRRPVV
GVDAEAREEL LDSRGTSFRR SLDVLRTRGA RPTTMALPGD GAAATPPLPI GVSILRRVDL
SQRLDPGKYS RQLNKLQAKL RLLGFQVYLQ KRPVVVVFEG WDAAGKGGTI QRITEKLDPR
SYVVHAIAAP TGEDKAHHYL YRFWRRLPPR GQIAIFDRSW YGRVLVERVE GFARPEEWQR
AYAEINEFER QLVEFGTIVV KFWMHLSPEE QLRRFEERQS IPYKAWKLTE EDWRNREKWP
QYEVAADEML LRTSTPAAPW TIIEAEDKRF ARIKALRTLV RRLEAELGRV KL