| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1074 |
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| Symbol | |
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| ID | 5208020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1334401 |
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| End bp | 1335825 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640594688 |
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| Product | peptidase M20 |
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| Protein accession | YP_001275433 |
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| Protein GI | 148655228 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0808796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACCTG GAGCAGCATC AGAGACGCTT CACACGGTTA TCTCGCATCT ACGCACACAG
CAGCAATCGC TTCTGGAGGC GCTGCACGAG ATTCTCTCGA TTCCCAGTGT CAGCATGGAT
CCGGCGCACA CCGCAGATAT GACAACTGCT GCACAGTGGC TGGCAGACTA TCTGCGACGC
ATCGGCATGG ATCATACCGC GATCATCGCC GACGATGGGC ATCCGATGGT CATCAGCGAG
TGGTTAGGAG CAGGCAATAC GGCGCCAACG TTGCTGATCT ACGGGCACTA CGATGTGCAA
CCTGCCGATC CGACGGATGC CTGGTACACG CCGCCTTTCG TTCCAACAGT GAGAAACAAC
GCCATGTATG CCCGCGGCGC GTCTGATGAT AAGGGGCAGG TTATGGCGGC AATCGCTGCG
CTCGAGGCAT GGCTGCATGT GACCGGGAGA TTGCCGGTGA ATGTCAGACT GATCATCGAG
GGTGAAGAAG AAACGTCCAG CGTGGCGCTG CGGCGTTTTG TTCGCACGCA ACCGGAACGT
CTGCAATGCG ATGCCGTGAT GATCATCGAC TCGACAATGT TTACCCCGCA GCAACCGCTC
ATCCTGTACG GAACGCGGGG GAACTGCTAC CTGGAGATCA CGGTTCGCGG ACCTGCGGGT
GACCTGCACT CAGGAACCTT TGGCGGCGCA GTAGAAAACC CTTTCAATGT TCTGGTCCGG
TTGCTGGCGG CGCTTCAGGA TGGCGTAACC CGCCGCGTGC GCGTGCCAGG TTTTTATGAC
CGGGTGCGCG CCGTCGATGA TACCGAACGG CGTCTGCTGG CATCACTGCC ACTTGATGAC
GCTGCTCTTC TGAGGATGAC CGGCGTACCG GCGCTCGCAG GCGAAGCCGG CTTTTCCGCT
ATCGAACGCG CCAGCATTCG ACCCACCCTG GATATTCACG GCATCGGCGG CGGTTTCACC
GGACCAGGGA AGAAAACCGT CATCCCGGCA CAGGCGACGG CGAAAATCTC AATGCGGCTT
GTTCCATACC AGGCGCCGCA CGAAATCGTA CAGTTCGTCA CCCGGTTTTT GCAGGAGCAG
GCGCCGCCAA CCGTTACACT CGATGTGAAG GTGCTGAGTG CATCCCATCC TGTCCTCATC
GATTATCGCG CCGGAGCGAT ACAGGCTGCA TCGCGGGCGT TCGAGGCAGC CTTCGGTGCG
CCGGCAGCCT TCACGATCGG CGGGGGCACA TTGCCAGTTG CCGCCGATCT GCAGGAGGCG
CTGCGGGCGC CGCTGGTCAT AACCGGTTTC GGCTTGCCCG ACGACAATAT GCATGCGCCG
AACGAAAAAC TGAACCTCGA CTGCTTTGCG CGCGGGTGCG AAATGATCGC CCACTACCTG
GCGCTGCTGG CGGCGTCTTC TGGGGCGCAA CCCTCTGCTC CCTGA
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| Protein sequence | MPPGAASETL HTVISHLRTQ QQSLLEALHE ILSIPSVSMD PAHTADMTTA AQWLADYLRR
IGMDHTAIIA DDGHPMVISE WLGAGNTAPT LLIYGHYDVQ PADPTDAWYT PPFVPTVRNN
AMYARGASDD KGQVMAAIAA LEAWLHVTGR LPVNVRLIIE GEEETSSVAL RRFVRTQPER
LQCDAVMIID STMFTPQQPL ILYGTRGNCY LEITVRGPAG DLHSGTFGGA VENPFNVLVR
LLAALQDGVT RRVRVPGFYD RVRAVDDTER RLLASLPLDD AALLRMTGVP ALAGEAGFSA
IERASIRPTL DIHGIGGGFT GPGKKTVIPA QATAKISMRL VPYQAPHEIV QFVTRFLQEQ
APPTVTLDVK VLSASHPVLI DYRAGAIQAA SRAFEAAFGA PAAFTIGGGT LPVAADLQEA
LRAPLVITGF GLPDDNMHAP NEKLNLDCFA RGCEMIAHYL ALLAASSGAQ PSAP
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