| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0952 |
|---|
| Symbol | |
|---|
| ID | 5207898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 1175318 |
|---|
| End bp | 1176382 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640594566 |
|---|
| Product | GHMP kinase |
|---|
| Protein accession | YP_001275311 |
|---|
| Protein GI | 148655106 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2605] Predicted kinase related to galactokinase and mevalonate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.70731 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACAT CTTCCTCTTC CGCAAAGCCT GATCGTATCA TCAACGGGAT TGCGCCCATC
CGTATCTGCG ACCTCGGTGG GTGGACCGAC ACCTGGTTTG CCGGGCATGG GACTATTTTC
AACATTGGCG TCTATCCGTA TGTCGAAGTA CAGGTCGCAG TATTTCCACG CCACATGCGT
GAGCATCAGA TCACGCTGCA TGCCGAGAAT TACGGCGAGC GCTACGTTGT TCTGCCGGGC
AGCGCCGAAC ACGTGCGTCA CCCGCTGCTC GAAGCCGCAA TCAACGAAGT TCCGTTACCC
GACAATGTGG CGCTGGAGAT CACGATCTTC TCTGATGTGC CTGCCGGCGC GTCGACCGGC
ACATCAGCCG CCGTCACGGT TGCGCTGGGT GCGCTCGATG CACTGACCCC CGGCAGGATG
ACCCCGCACG AAATCGCCTA CGCCGCGCAC CGGGTCGAGA CGCAACGATT GGGATTGCAG
AGCGGCATCC AGGATCAACT CTGCTCGGCA TACGGCGGGA TCAATTTCAT CGAGATGTTT
CACTATCCCT ATGCGACTGT TTCGCAAATA CGCATTCCTG ATACTATCTG GTGGGAACTG
GAACGCCGTC TGGCGCTGAT CTTCCTCGGT CGCACCCATA GTTCGTCGGC GATGCATGAG
CAGGTGATTG CAGCGCTGGA ACGCGAGGGT GACGCTTCTC CCCGGCTCGA AGCGCTGCGC
CGCCGCGCCA TCTGCGCTCG CGATGCGCTC TACGCCGGCG ACTTCGTTGC GCTTGGTCGG
GCGATGATCG ACAACACTGA CGCCCAGCGC GCCCTCCATC CTGCGCTCGT CAATGCCGAT
GCCGATGCAG TGATCGCGCT TGCCCGCGAG CACGGCGTCC TGGGATGGAA AGTCAACGGC
GCTGGCGGCG AAGGCGGCTC GCTGACCCTC CTCTGCGGAC CTGACGCCAG CGCCAATCGC
GCGCTGCTCC GCGACATTCG CCGCCTCAGT CCGCTCTTCC AGCCTATCCC GATCTACCTC
AGCCGGATGG GTCTGCGGGT GTGGACGACG GATGGGGAGA GATGA
|
|---|
| Protein sequence | MSTSSSSAKP DRIINGIAPI RICDLGGWTD TWFAGHGTIF NIGVYPYVEV QVAVFPRHMR
EHQITLHAEN YGERYVVLPG SAEHVRHPLL EAAINEVPLP DNVALEITIF SDVPAGASTG
TSAAVTVALG ALDALTPGRM TPHEIAYAAH RVETQRLGLQ SGIQDQLCSA YGGINFIEMF
HYPYATVSQI RIPDTIWWEL ERRLALIFLG RTHSSSAMHE QVIAALEREG DASPRLEALR
RRAICARDAL YAGDFVALGR AMIDNTDAQR ALHPALVNAD ADAVIALARE HGVLGWKVNG
AGGEGGSLTL LCGPDASANR ALLRDIRRLS PLFQPIPIYL SRMGLRVWTT DGER
|
|---|
| |