| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0945 |
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| Symbol | |
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| ID | 5207891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1165815 |
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| End bp | 1166681 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640594559 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_001275304 |
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| Protein GI | 148655099 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCATG ATGATCGTCA GATAGGACGA ATCCTCAGCC GGCGCGAAGT GCTGATGCTG
ATTGGTGCAT CTGCTGCAAC CCTGCTGATG GGCTGCGGTT CGATGGGTTC AGGCGCGACG
CCGGAAACGT CTACGGGAAG TGTTCCGTCA GCAGCGCCGT CTCCGCCCGC CATGCCTCAA
CCCTCACCAT CTCCTGCGGC GACCGCCACG CAGGGGGCAT TAGCATTGCC TGCTACGTCA
GCGCCGGTGA CCACACCGGT ACGCATCCCC GTTCCGGCAT GCATTGTGCG CCCGGAGCAG
ACAGAAGGAC CGTATTTTGT GGACACCCGA CTGAACCGCA CCGATATTCG CTCTGATCCC
ATCAGCGGCA TCGTCAAAGA GGGGTTGCCA TTAACCCTGA CGTTCGTTGT CAGCCGGATT
GGGAACGATG GATGCGCGCC GCTACGTGAC GCGATGGTGG ACATCTGGCA CTGTGATGCG
CAGGGCTTCT ATTCCGACGT GCGCGACCCA CGCCGTGATA CAACCGGGGA GCAGTGGCTG
CGCGGGTATC AGATGACCGA TGCCAGCGGC ATCGCCGCAT TTACGACGAT TTATCCCGGC
TGGTATCCCG GACGCGCGGT GCATATCCAT TTCAAGATTC GCACCGCCGC CGCCGGTCAG
GTGTACGACT TCACCTCACA ACTCTACTTC GATGATGCCG TGAGTGATGC CGTCTTCGCG
CAGGCGCCCT ATGCCGCTCG GGGAAATCGC ACGACGCGCA ACCAGAACGA CGGCATTTTC
CGCAGAAACG GCGAACAACT CGTCCTGGCG CTCACCCCGA CTGACCAGGG GTATGCAGCG
ACGTTCGAGA TCGGGTTGCA ACTGTGA
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| Protein sequence | MDHDDRQIGR ILSRREVLML IGASAATLLM GCGSMGSGAT PETSTGSVPS AAPSPPAMPQ
PSPSPAATAT QGALALPATS APVTTPVRIP VPACIVRPEQ TEGPYFVDTR LNRTDIRSDP
ISGIVKEGLP LTLTFVVSRI GNDGCAPLRD AMVDIWHCDA QGFYSDVRDP RRDTTGEQWL
RGYQMTDASG IAAFTTIYPG WYPGRAVHIH FKIRTAAAGQ VYDFTSQLYF DDAVSDAVFA
QAPYAARGNR TTRNQNDGIF RRNGEQLVLA LTPTDQGYAA TFEIGLQL
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