| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0853 |
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| Symbol | |
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| ID | 5207799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1061001 |
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| End bp | 1062740 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640594471 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_001275216 |
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| Protein GI | 148655011 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3463] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.691101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGGGGC GCAGCGGCGC TACGCACGCA CCGGCGGCGG GGGCCATCGC GGGGGCGGCG
CGAGGCGCGA GCGGTGTAAG GCGAGGAACA GGCGAGAGTT CAGAGCATAT GACACGAGCG
CTTGCATCAC ACCACGAATA TTCCAACACA GGCATTGTGC AGCTACTCGC AACGATCGAG
CGACGGGCGG GTCTGACGCT GGCGGCGCTC ATTGCGCTGT ACATCGCCAT TCTTTTCTTT
GGTCTGACGT TCAAGTACGT CCATTGGGCG CAGGGGTACG ATCAGATCGA CTATCAGCAA
TCGATCTGGA ATACGACGCA GGGACGATTT CTTGAAATAT CACACTATCG CCACACCGAC
CATCTGTGGG GGATGGATTT CATTCCGGCG ATCCTGCTGA TCGTTCCGTT CTATGCGCTG
TTTCCCTCGG CGTTGACGCT CAATTTTTTT CAGGCGCTCT TTATGGCGCT CGGTGCGCTG
CCGGTGTACG GGATTGCGCG GGATCGCTTT GGTGGTTCGC GTCTTGCCGG GCTGGGATGG
GCTGGCGTGT ATCTGCTCTA CCCCTCGCTC TGGTTTGTGA CGATGAGCGC TCCATGGCAA
CCGCGCACGC TGGCAATTCC GGCGCTGCTG GGTGCATTCT TTTTTTTGCA GCGTGCTGCG
GATGGACGGG CGAACACGCG TGATTTGGGC GCATACGTGG GATTGCTGGC GCTCGCGCTG
ACAACCCGCA CCGACGTGTC GCTGGTGGTG ACCATGTTCG GCTTCCTGGC AGCGTTGTGG
CGTGTGGGAT GGCGCTGGGC GCTACCGCCG GTTCTGATCG GGCTGGCATG GTTCTATCTG
TCGACCAGTG TTATCGTGCC GTCGTTCTAC CGCCCGGACT ATCAGGTGCG TCAAGGCGAG
ACTGGCACGG TGACGGAGGG GGATTATACC GAAATCTGGC CCGGCAAAAG CCCACAACTT
GCCTACTATT CGCATCTCGG CGACAGTGCA GGCGCCATTC TCTGGACGAT TGTCAGTCGT
CCTGGTGATG TGCTGCGCCT GATGTTTACG CCCGACAAGG TGGTGTACCT GTTTCTCATG
CTGCTGCCGC TGGCGTTGCT GCCGTTGCTC GCACCCGATG TCGCGCTGCT GGCGGCGCCG
CCGCTGGCGA TGAACCTGCT CTCGCTGCGC CCGTTTCAGA TCACCGTGCG TGAACAGTAT
CAGGCGATCG TTATTCCCGG TCTGATACTT GCCGCCATCA TTGGCGCTGC GCGGTTGTGG
CGATGGTGGC AGGCAAGAAA CGCAGCGATA GACCAACGTA GCGTCGGTGT GGCTCGGCGC
AACAATGGCG TATCGCGTGC AGCATATGCG CTGATGATCG GCGCGATTGG CATCGCAGCA
GCAACCAATC TGGCGTATCG TAATCCGGTG GCGACAACGG TGCTCTACCG CGAGACACCC
GAACGACTGG CAGCGATGGA GCGTCTGGCT GCACTGATCC CGCCCGACGC ATCGCTGGGG
GTTACGTCGT TTCTCGCGCC GCGGATGATG CCACGCCGCT TCATCTATTA CGTGCCGCCC
GATGAGTCGT TTCCGCCGCT CGAGCGCGCC GAGTATCTCT TTATCGATAC ACGCGCCGCA
GCACTGCGCA CCGATCGTCA CCGCGATTTC GTTCAACGCC TGCGTGAATC GGGTCGCTGG
CAGGTGATTG CCGAAGAACA GGATCTGCTG GTGATGCGTC AGGCGCCGGA CAATCCTTAA
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| Protein sequence | MEGRSGATHA PAAGAIAGAA RGASGVRRGT GESSEHMTRA LASHHEYSNT GIVQLLATIE
RRAGLTLAAL IALYIAILFF GLTFKYVHWA QGYDQIDYQQ SIWNTTQGRF LEISHYRHTD
HLWGMDFIPA ILLIVPFYAL FPSALTLNFF QALFMALGAL PVYGIARDRF GGSRLAGLGW
AGVYLLYPSL WFVTMSAPWQ PRTLAIPALL GAFFFLQRAA DGRANTRDLG AYVGLLALAL
TTRTDVSLVV TMFGFLAALW RVGWRWALPP VLIGLAWFYL STSVIVPSFY RPDYQVRQGE
TGTVTEGDYT EIWPGKSPQL AYYSHLGDSA GAILWTIVSR PGDVLRLMFT PDKVVYLFLM
LLPLALLPLL APDVALLAAP PLAMNLLSLR PFQITVREQY QAIVIPGLIL AAIIGAARLW
RWWQARNAAI DQRSVGVARR NNGVSRAAYA LMIGAIGIAA ATNLAYRNPV ATTVLYRETP
ERLAAMERLA ALIPPDASLG VTSFLAPRMM PRRFIYYVPP DESFPPLERA EYLFIDTRAA
ALRTDRHRDF VQRLRESGRW QVIAEEQDLL VMRQAPDNP
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