| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0827 |
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| Symbol | |
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| ID | 5207771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1026705 |
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| End bp | 1028822 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640594444 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001275191 |
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| Protein GI | 148654986 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000125239 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0549007 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTCA CCAGAGAATC GGCGTCCTGG CATCAACCCA CTGCCTGGGA GCGAAGCGAA
GGTTCGCCCG CTCCATTCGG TCCGACGTGG GTTCCTGCGG CTCAGGGGTA CAATTTCGCG
CTCTTCTCGC GGCACGCGAC GAGTGTAACG CTGCTGATCT ATAGCGCCGA CGACGTTGTG
ACGCCGATCT ATCGTCATCA CCTCGATCCG CGTCGCAACA AAACCCAGCA TGTCTGGCAC
TGCTGGGTTC CGGCTTCCGC CATTCCAGGC GGGCGCTACT ATGCGTATCG TGTTGATGGA
CCGCGCGCAC CCGAAGAGGG GCACCGCTTC GATCCGACGA AGATTGTCCT CGATCCATAC
GCACCAGAGG TCTTCTTTCC GCCGAACTAC AGTCGCGAGG CGGCGATGCG TCCGGGTCCG
AACGACGGGC GCGCGCCGCT CGGCGTGCTG CCCCGCCACG AAGCGCCCTA CGACTGGAGC
GGCGATGTGC GCCCGAATCA CACCCACGAT TTGATCGTCT ATGAACTGCA TGTGCGCGGC
TTTACCGCGC GCGCCAATTC GGGGGTTACA CCGGAAGAGC GCGGTACATT CATCGGCTTG
ACCCGGAAGA TTCCTTATCT GCTGGAATTG GGGGTGACGG CAATCGAACT CTTGCCGGTT
CATCAGTTCG ATCCCCAGGA AGGGAACTAC TGGGGGTATA TGACCCTCAA CTTCTTCTCA
CCACACAGCG ACTACGCTAT CGAGGATCCG CACCGCGAGT TCTGCGAGAT GGTCAGAGCC
ATGCATGCAG CCGGTATCGA AGTCTGGCTG GATGTGGTCT ACAACCATAC GAGCGAGGGC
GATGAGCGCG GACCGACGTA CTCCTACCGG GCGATTGACA ACCGGAGTTA TTACCTGCTG
ACGCCCGACC GTCGCCAGTA CATTAACACC AGCGGTTGCG GCAATACGCT GCGCTGCGCC
AATCCGGTCG TGCGCACCCT GATCATCGAT AGCCTCGATA CCTGGATCCG GTCGATGCGC
ATCGATGGCT TTCGCTTCGA TCTTGCATCG ATCCTGGCGC GCAATAACGA CGGGTCGCTT
AATCACGAAG ATCCGGCGCT GATCCACGAG ATCAGCATGC TCGGTCAGCG CCACGGCGTG
CGCCTGATCG CCGAAGCGTG GGATATCAGC GCCTACCTGC TCGGACGCGC CTTTCCGGGG
ATGACGTGGC GCCAGTGGAA TGGCAAGTTC CGCGACGATG TGCGCGCCTT TGTGCGCGGC
GATCCCGGCA AAGTCGGCGA CGTGATGTGT CGCCTGTATG GCAGCGATGA TCTGTTCCCC
GATACGCTGG CCGACTCGTA TCGCCCGACG CAGAGCGTCA ATTTTGTGAC CTCGCACGAC
GGATTTTGCC TGTACGATCT GGTGTCCTAC AATCAGAAGC ATAATTGGGC GAATGGACAT
CAGAACACCG ACGGAACCGA TCAGAACTTT AGCTGGAACT GCGGTTGGGA GGGAGATGAA
GGGGCGCCGC CGGAGGTGCT GGCGTTGCGT CGTCGTCAGG CGCGGAATTT CTTCACGCTG
CTCATGCTGG CGAACGGCAC GCCGATGTTC TGCGCCGGCG ATGAGTTCCT CAATACCCAA
CGCGGCAACA ACAATCCGTA CAACCAGGAC AATGAGACCA CCTGGCTCGA CTGGGATTTG
CTGGAGCGCA ATCGTGATAT GTTTCGCTTT GTCAAGACGC TGATCGCGTT CCGCAAAGCG
CACCCTTCAA TCCACCGCAG CCGTTTCTGG CGCGATGACG TGCGCTGGTA CGGCGTCAAT
GGTCCCCCCG ACACATCGTA TGAGTCGCAT GCGTTCGCCT ACTGCCTGCA CGGAGCGTCG
GTCGGCGATT GCGATCTCTA TGTGATGATC AACGCCTTTT GGGAAGACCT GATCTTTGCC
ATCCAGGAAC ATCCGCCAGG CGGGTGGTGG CGGGTCATCG ATACAGCACG CCCTTCTCCC
GATGATATTT ACGAGGCAGG GCATGAGGCT CCGGTCTGTC AACCGTTCTA TACGGTCGGC
GCACGTTCGG TTGTGGTGTT GCGCTCGCGC ACAGCGCAGG AACTCCTGCG CGCGCAGACT
TTCGATGAGA AGCGGTAG
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| Protein sequence | MMLTRESASW HQPTAWERSE GSPAPFGPTW VPAAQGYNFA LFSRHATSVT LLIYSADDVV
TPIYRHHLDP RRNKTQHVWH CWVPASAIPG GRYYAYRVDG PRAPEEGHRF DPTKIVLDPY
APEVFFPPNY SREAAMRPGP NDGRAPLGVL PRHEAPYDWS GDVRPNHTHD LIVYELHVRG
FTARANSGVT PEERGTFIGL TRKIPYLLEL GVTAIELLPV HQFDPQEGNY WGYMTLNFFS
PHSDYAIEDP HREFCEMVRA MHAAGIEVWL DVVYNHTSEG DERGPTYSYR AIDNRSYYLL
TPDRRQYINT SGCGNTLRCA NPVVRTLIID SLDTWIRSMR IDGFRFDLAS ILARNNDGSL
NHEDPALIHE ISMLGQRHGV RLIAEAWDIS AYLLGRAFPG MTWRQWNGKF RDDVRAFVRG
DPGKVGDVMC RLYGSDDLFP DTLADSYRPT QSVNFVTSHD GFCLYDLVSY NQKHNWANGH
QNTDGTDQNF SWNCGWEGDE GAPPEVLALR RRQARNFFTL LMLANGTPMF CAGDEFLNTQ
RGNNNPYNQD NETTWLDWDL LERNRDMFRF VKTLIAFRKA HPSIHRSRFW RDDVRWYGVN
GPPDTSYESH AFAYCLHGAS VGDCDLYVMI NAFWEDLIFA IQEHPPGGWW RVIDTARPSP
DDIYEAGHEA PVCQPFYTVG ARSVVVLRSR TAQELLRAQT FDEKR
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