| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0797 |
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| Symbol | |
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| ID | 5207740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 989671 |
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| End bp | 990582 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640594413 |
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| Product | PDZ/DHR/GLGF domain-containing protein |
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| Protein accession | YP_001275161 |
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| Protein GI | 148654956 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.661347 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAT CATCCGGCGC CGATCCAATC AGCGCACTTT CACACCAGAT GGCGGACGCC
GTCGAACGTA TCCGTCGCTC GCTGGTGATG GTGAACGGCA GACAACGCCA GCCTGCCAGC
GGTATCATTA TTGCCGCCGA CCAGGTTCTG ACGGCGGACC ACGTCCTGGA GCGCGACGAT
GACCTGACGA TCCAGACCGA TGATGGACGC ACCCTGGCGG CGCGCCTGGT CGGTCGCGAC
CAGACCAGCG ACCTGGCGCT GTTGCGGGTC GATGCACTGG TCGGCGAGAT CGCAGCGCAG
GCGCTCGATC CGGCGCGCGT CGGTCAGTTC GTGCTCGCCG TCGGGCGCCC CTCTCCGGGC
GGACCAATGG CGAGCCTGGG CATTGTCAGC GCGGTCGGCG GTCCATTACG CACCCGACGA
GGCATGGTCG AGCAGGTGAT CCAGACCGAT GCCACACCAT ACCCCGGTTT TTCGGGCGGC
GCCCTGATCG ATGCGACCGG GGCGGTGCTG GGGCTGTTCA CAACCGGGCT GATCGGCGGC
GTGGCGCTGG CGCTCCCCGC GCCGCTCGCC TGGCGCATCG CCCACACCCT GGCGAGTCAG
GGGCATGTTC GCCGTGGCTT TCTCGGCATC AGCAGCCAAC CGGTTACGAT TCCGGCGGGG
CAGCGCGCCG GGCGCAACCA GGAACGCGGG CTGCTGATCG TGCGCGTCGA GCCGGACAGC
CCGGCGAGTC GGGCTGGACT GCTCATCGGC GACATTCTGG TTGGGATCGA TGGCGTGGTT
CTGAACGATA CCGACGATTT GCAGGCAGTT TTGAGCGGCG ATCGCGTCGG CGCGACTGTC
CCGGCGGAGA TTATTCGCGG CGGAGCGCTG ATGACGCTGA CGGTGACCAT CGGACAACGC
AAAGGGTCGT AG
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| Protein sequence | MTASSGADPI SALSHQMADA VERIRRSLVM VNGRQRQPAS GIIIAADQVL TADHVLERDD
DLTIQTDDGR TLAARLVGRD QTSDLALLRV DALVGEIAAQ ALDPARVGQF VLAVGRPSPG
GPMASLGIVS AVGGPLRTRR GMVEQVIQTD ATPYPGFSGG ALIDATGAVL GLFTTGLIGG
VALALPAPLA WRIAHTLASQ GHVRRGFLGI SSQPVTIPAG QRAGRNQERG LLIVRVEPDS
PASRAGLLIG DILVGIDGVV LNDTDDLQAV LSGDRVGATV PAEIIRGGAL MTLTVTIGQR
KGS
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