| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0790 |
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| Symbol | |
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| ID | 5207733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 979924 |
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| End bp | 981042 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640594406 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001275154 |
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| Protein GI | 148654949 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.279429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTTC TCGACATCGT TCACGTGCAG AAGAGTTTTG GAACAACCAT TGCCGTTGAA
GACTTCACCC TGGCAGTCGA GCAGGGTGAG TTCGTTTCGT TCCTGGGACC GTCGGGGTGC
GGCAAAACGA CGACGCTGCG CATGGTTGCG GGGTTTGAAA AGCCGACATC GGGGCGGATC
GTCATCGACG GCGTCGATGT GACCGATATG CCGCCCAACC GGCGCAACAT TGGCATGGTG
TTCCAGTCGT ATGCGCTCTT CCCGAATATG ACTGTCGCCG ACAATATCGG TTTCGGGCTG
CGGATCGCGC GTCGTCCGGC GCACGAAATC CACGCGCGGG TCGAGGAACT GCTGCGCATC
ATTCATATGC CCGAGTTTGG GCGGCGCTAT CCGTATCAGT TATCCGGCGG GCAGCAGCAG
CGGGTCGCGC TGGCGCGGGC GCTGGCGATC CAGCCAAAAC TGCTGTTGCT CGATGAGCCG
CTCTCGGCGC TCGATGCCAA AATACGCGCC TCGCTCCGCC AGGAGATCCG TGACATTCAA
CGCCAACTCG GCATCACCAC GATTTATGTC ACCCACGATC AGGAAGAGGC GATGGCTCTG
TCCGACCGGA TTGTGGTGAT GAGTCGCGGG AAGATCGAGC AGATCGGCAC GCCCTTCGAG
GTGTACAACT TTCCTGCAAC CCGCTTCGTC GCGTCGTTCG TCGGCACGCT CAACCAGATC
GAGGCGACCG TCGTCGATGC CGCTATCGGA CTGCTGGCGG TTGAAGGTCA GCAATTCCGC
ATTGCCCGCC CCCTCCCGTA TCGCTCAGGC GACACGGTGA ACATCGCCAT CCGCCCGGAG
TTGATCGCGC TCGATGGGCA GTTCAACAGT GCGATGAACC GGTTGAGCGG AACGGTCGAA
GATGTCACCT TTCTCGGCTC GATTGTGCGG GTGCGCCTGC GTCTGGCAGC CAACCGGCTG
TCGATGGACA TCTTCAACAA CCCGCATCTG CGCCCGCCGC AACCGGGAGA GACAATCACT
GTGCATTTTG CGCCCGAAGC CTGCCTGGCG CCGGGCGACG ACACGCCGCG CGGAGCGAAT
GCTCAACCAT TGTCGGCGAG CGCTGCGGAA GCCGCGTGA
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| Protein sequence | MAFLDIVHVQ KSFGTTIAVE DFTLAVEQGE FVSFLGPSGC GKTTTLRMVA GFEKPTSGRI
VIDGVDVTDM PPNRRNIGMV FQSYALFPNM TVADNIGFGL RIARRPAHEI HARVEELLRI
IHMPEFGRRY PYQLSGGQQQ RVALARALAI QPKLLLLDEP LSALDAKIRA SLRQEIRDIQ
RQLGITTIYV THDQEEAMAL SDRIVVMSRG KIEQIGTPFE VYNFPATRFV ASFVGTLNQI
EATVVDAAIG LLAVEGQQFR IARPLPYRSG DTVNIAIRPE LIALDGQFNS AMNRLSGTVE
DVTFLGSIVR VRLRLAANRL SMDIFNNPHL RPPQPGETIT VHFAPEACLA PGDDTPRGAN
AQPLSASAAE AA
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