| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0785 |
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| Symbol | |
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| ID | 5207728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 971316 |
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| End bp | 972677 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640594401 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001275149 |
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| Protein GI | 148654944 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.173874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACGA CGCGCAACCG TGCGCCCGAA GGAGATGCGA TATCGATACG GAACGGGCGC
CTGTATGTGC CAGATATGCC CATCATTCCT TATGTCGAAG GCGATGGCAC CGGTCCCGAT
ATCTGGCGGG CGAGCGTGCG CGTTTTCGAT GCTGCTGTCG AACGGGCATA TGGCGGGCGG
CGGAAGTTGA TGTGGTACGA AGTGCTGGCA GGTGAGAAAG CCTTCAATCT GACCGGCAAC
TGGTTGCCCG ACGAAACGGT CGAAGCGTTC AGGCAGTACC TGGTCGGCAT CAAAGGTCCG
CTGACAACGC CGGTGGGCAG GGGGATCCGC AGCCTGAACG TCGCGCTGCG TCAGTTGCTC
GATCTGTATG TCTGCCTGCG CCCGGTACGC TATTTTCAGG GCGTTCCGTC GCCGGTCAAG
CGCCCTGAAC TGGTGGATAT GGTCATTTTC CGCGAGAACA CCGAAGATAT TTACGCTGGC
ATCGAGTATG CCGCCGGTAC GCCCGAGGCG CAGAAAGTGC TCGATTTTCT GCGCACCACG
TTTCCGAAGG ATTTTGAGAA GATCCGCTTC GGCACTGCGG AAAAAGCGCG TGAGTTCCTC
AGTCTGCTCG GCAATGGCGA CGGAGAAGGC GCTGTCGAAG TCGGCATCGG CATCAAACCC
GTCAGTCGGT TAGGTACGGA ACGCCTGGTC GCAGCCGCCA TTCAGTACGC CATTACCCAC
CGTCGCCGGA GCGTCACATT CGTGCATAAA GGCAACATTA TGAAATTCAC CGAGGGTGCA
TTCCGCGATT GGGGGTACGC CCTGGCGGAA CGCGTCTTTG GCGAGCATGT CTACACCTGG
GCGCAGTGGG AGCGTACAAA GGCGGAGAAG GGCGAAGCAG CGGCGAACGC CGAGCAGCGC
GAAGCGCTGG CTGCCGGAGC GATCCTCATC AAGGATGCCA TCGCAGACAT CACGCTTCAG
CAGGTGCTCA CGCGCCCTGA AGAGTTCGAT GTGATTGCGA CTCTCAACCT CAACGGCGAT
TACCTGAGTG ACGCGCTGGC GGCGCAGGTT GGGGGCATTG GCATTGCGCC TGGCGGCAAC
ATCAACTACA TCACCGGGCA CGCGATTTTC GAGGCGACGC ACGGCACAGC GCCAAAGTAC
GCCAATCTGG ATCGGGTCAA CCCGGGCAGC GTCATCCTGA GCGGTGATAT GATGCTGCGC
TACATGGGTT GGACCGAAGC GGCAGACCTG ATCATCCGCG CACTGGAAAA AACGATTGCC
CAGAAGATCG TCACCTACGA CTTCGCCCGA CTGATGACCG GCGCAAAGGA AGTCAAGACG
TCACAGTTCG CCGATGCAAT GATCGCCAAT ATGGACGAAT GA
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| Protein sequence | MTTTRNRAPE GDAISIRNGR LYVPDMPIIP YVEGDGTGPD IWRASVRVFD AAVERAYGGR
RKLMWYEVLA GEKAFNLTGN WLPDETVEAF RQYLVGIKGP LTTPVGRGIR SLNVALRQLL
DLYVCLRPVR YFQGVPSPVK RPELVDMVIF RENTEDIYAG IEYAAGTPEA QKVLDFLRTT
FPKDFEKIRF GTAEKAREFL SLLGNGDGEG AVEVGIGIKP VSRLGTERLV AAAIQYAITH
RRRSVTFVHK GNIMKFTEGA FRDWGYALAE RVFGEHVYTW AQWERTKAEK GEAAANAEQR
EALAAGAILI KDAIADITLQ QVLTRPEEFD VIATLNLNGD YLSDALAAQV GGIGIAPGGN
INYITGHAIF EATHGTAPKY ANLDRVNPGS VILSGDMMLR YMGWTEAADL IIRALEKTIA
QKIVTYDFAR LMTGAKEVKT SQFADAMIAN MDE
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