Gene RoseRS_0784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0784 
Symbol 
ID5207727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp970612 
End bp971253 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content60% 
IMG OID640594400 
Productsignal-transduction protein 
Protein accessionYP_001275148 
Protein GI148654943 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.26594 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACTG TGCGTGGCCG CTTCGACGGC AAAACCATCG AATTGCTCGA ACCGCCGCCA 
GTTGATGAAG AAACCTTCGT CCTGGTCACC TTTCTCGAAG GACCGCTGGA GACCGCTGCC
GCACGTGAGA GTCGCCGCGC GGTGAGTGTT GCCATGTTTT CACTGGATCG CTACGCCGGT
CCGCTCAAGC AACGGTTACG CGCCGGTCAA CCCTCCGCCG ATGCGCCGCG TCCTTTCACC
GTCGGCGAGA TCATGACGCG CAAAGTGATC AGCGTTGCGC CCGATGCCAC TGCCGCCGAA
GCCATCCATA TCATGAACAA GCATGGGATC ACCAGTGTGC TGGTCGAACC GGATGCAAGC
GGTGAGTGGG GGATCATGAC CATGCGCGAC GTTCTGCAGA AGATCGTCGC CGCTGATCGC
TCACCGGAAG AAGTCGCCGT CAATGAACTG GCATCGCGAC CGCTGGTCTA CGTCTCGCCG
GAAATGTCGC TGCGCGACTG TAGCAAACTG ATGATCGACC GGAACATCCG TCGCGCGGCA
GTGCGGGAGC GTGATCGGAT CGTCGGGATT ATCAGCGATA CCGATATTTT CCAGGTGGTC
GAAGAGCGTG GCTGGGGACC GATGCCGCCG ACTGAAGCAT GA
 
Protein sequence
MFTVRGRFDG KTIELLEPPP VDEETFVLVT FLEGPLETAA ARESRRAVSV AMFSLDRYAG 
PLKQRLRAGQ PSADAPRPFT VGEIMTRKVI SVAPDATAAE AIHIMNKHGI TSVLVEPDAS
GEWGIMTMRD VLQKIVAADR SPEEVAVNEL ASRPLVYVSP EMSLRDCSKL MIDRNIRRAA
VRERDRIVGI ISDTDIFQVV EERGWGPMPP TEA