Gene RoseRS_0728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0728 
Symbol 
ID5207667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp898875 
End bp899906 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content68% 
IMG OID640594342 
Producthypothetical protein 
Protein accessionYP_001275094 
Protein GI148654889 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3064] Membrane protein involved in colicin uptake 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGAACC GCTATGACGC ACACGACGAC CCCCGCATCT GCGCCGGGCG CACCGCCTGC 
CGACGACCGT TTCGTTACGG CTGGCGCCTC GTGCCGCGTC CCACCCCCGA CAATCCGCAT
CATCTGGAAC AGGTTCCGCT GACCCTGGAG GATGTCCTGC ACCCGGAAGT GGGAGATTTC
ATCGTGCACA GCGACCGCCA CGCGATCGAC CGGATGTACC TGACGGCAGT GCTGCGCACC
CGCCTGGAGG AATCCGGCGC GGCGATTGTG CTCAGCGATG TGCGCATTGC GTGGGATGTG
CCCGACCTGC GCCCGCACGG ACCGGATGTG ATGGTCATTC CCGGCATCGT CGAACGCCAG
GACTGGAGCA CGTTCGACGT GGCGGTCGAA GGGGCGCGTC CGGCGATGAT CATTGAAATC
ACCTCGCCGG AGACGCGCGA GAACGATCTG GAGATCAAGG TTGACCATTA CGCGCGGGCA
GGGGTGCCGC AGTACGTGAT TGTGGACAAT CAGAGTCGCA GGGGAGCGCG CCGCCTGCGA
CTGCTCGACT ATCGGCTGGC CGACGGGGTG TATCGACTGC ACCCGCCGGA CGCGGCAGAG
CGGGTGCATC TGGTGATTGC CGACCTGTGG CTGAGAATTG AAGGCGATCA CGTCGTCTGC
TACGACGAGC ACGGTGCGGC GTTCGGCGAC TATGCGACCG TGGTGCGGCG GGCGAAGGAA
GCAGAGCGGC AGACGCGGCG GGAAGCGGAA CGGGCACGGC GCGAAGCAGC AGCGCGGGAA
GCCGAAGCGC GCCTGCGCAC CGCCGCCGAG GAGCAGGCGC GGCGAGAAGC GGAACGGGCG
CAGCAGGAAG CAGCGGCACG GGAAGCCGAA GCGCGCCTGC GCGCCGCTGC CGAGGAGCAG
GCGCGGCGAG AAGCGGAACG GGCGCAGCAG GAAGCAGCGG CACGGGAAGC CGAAGCGCGC
CTGCGCGCCG CTGCCGAAGC GCGCCTGCGT GCTCTTGAGG AAGAACTGCG CCGGTTGCGC
GGCGAAGGGT GA
 
Protein sequence
MRNRYDAHDD PRICAGRTAC RRPFRYGWRL VPRPTPDNPH HLEQVPLTLE DVLHPEVGDF 
IVHSDRHAID RMYLTAVLRT RLEESGAAIV LSDVRIAWDV PDLRPHGPDV MVIPGIVERQ
DWSTFDVAVE GARPAMIIEI TSPETRENDL EIKVDHYARA GVPQYVIVDN QSRRGARRLR
LLDYRLADGV YRLHPPDAAE RVHLVIADLW LRIEGDHVVC YDEHGAAFGD YATVVRRAKE
AERQTRREAE RARREAAARE AEARLRTAAE EQARREAERA QQEAAAREAE ARLRAAAEEQ
ARREAERAQQ EAAAREAEAR LRAAAEARLR ALEEELRRLR GEG