Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0661 |
Symbol | |
ID | 5207599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 825939 |
End bp | 827816 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640594277 |
Product | ABC transporter related |
Protein accession | YP_001275030 |
Protein GI | 148654825 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.127952 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGAAG TTTCTGGAGG ACGACGGGGG CGCCGTCCGT TCGAGCCTGA ACCTGCCCGG ACGTGGTCTG AACGCCTGGC GCAGGTGCGT ACTGCGTTCG GCAACATTCC CGGAGCGTTT CGTCTGGTAT GGCGCGCCGA CCGGCGATCA ACGCTGGTGA TGGCGGCGCT GACGCTGGTT GCCGCTGCAC TGCCTGCGGC GCAGGCATGG GCTGGCGCTT TGATTGTCGA CACGGTCGTC GATTCGTTTA CTGCGCGCGT CGATCCACTG GCGGGGCTGG AGCGCACTCT GCCATACCTG GGATTTGAAC TGGCACTGCT GCTGATCGGC GCTGCTGCGG CTCAGATGCG CATGTTCTAC GAGCACGTGC TCAACGCCCG TCTGGGGCAC GCGATCAATG TTGATATTAT CCGAAAAGCG CTCTCGCTCG ATCTCTCCTA CTTCGAGGAT GCCAGTTTCT ACGATAAGTT GCAGAATGCG CGGCGTGAAG CCGATTTCCG CGCGCTCGGC ATTATCAATG GTTCGTATAG CGTGGTACAG AACCTCCTGA CCCTCCTCTC ATTTGCGGTG CTGCTGCTGG CATTCAATCC GTGGATCACG CTGGTGCTGT TCGGGGCGAC GATCCCGGCA TTTGTGGCGC AGGGACGGTA CAGCCATCTC TACTTTCGCT TGCTGACCTG GCACGCGCCG GAGTTTCGCC GGATGCAGTA CCTCGAACAT GTGCTGACCG TCGATAGCAG CGTCAAAGAA GTGAAACTGT TCGGCCTGGG TGAGCCGCTG TTGAAGCGCT ACAGCGATAC CTTTCAGGTC TTCTTTTGCG AGGATGTCGA TCTGGCGCGG CGTCGTTCGC TCATCAGCGT CGGATGGGGA GTGATCGCCA ACCTCAGTTA CTACGGCGCA TACGCCTGGA TTGTGTTCGT GACCATTGCC GGCACGATCA CGCTGGGAAG CATGACCCTC TACCTGACCC TCTTCCGGCA GAGTCAGAGC GCCTTTCAGA GTCTGTTCAG CAACGTCACC AGGCTGTATG AAAACGGTCT GTTCATGGAT AACCTGTTCA GTTTTCTGAG TCTTCAACCG CATATGAGCC GCGCCACGCA ACCGGTCGCT GTTCCTCCCC GCCTGCAACG CGGTCTTGAG TTTCGTAACG TATCGTTCCG TTATCCTGGA CGCGATGATT GGGCGCTGCG CAACATCAAC CTGACGATTG CACCCGGCGA AAAACTGGCG CTCGTCGGAC CGAACGGCGC CGGTAAGACA ACGCTGATCA AACTCCTCAC CCGCCTCTAC GATCCAACCG AAGGGGAGAT TCTGCTCGAC GGCGTGGATC TGCGCGATTA TGACATCGAC GAGGTGCGTC GTCGCATTGG GGTGATTTTC CAGGATTTCG TGAAGTACCA GTTGAGTGCG CGCGAGAATA TCGGCTTCGG TCAGATCGAT CGTCTCGACG ATGAGTCACG GGTCCGTGAG GCGGCGCAAC GCGGCGGCGC CGACGACATT ATCGCCGAAC TGCCCGCCGG GATGGAGACG ATGTTGGGGC GCTGGTTCGA GAACGGGTTT GAGTTGTCGG GCGGGCAGTG GCAGAAAATT GCGCTGAGCC GCGCCTTTAT GCGCGAGGGC GAGGTGCTCG TGCTCGATGA ACCGACCGCA GCGCTCGATG CTGAACGGGA GTATGAGATC TTCCAGCGCT TCCGTGAATT GACCGCCGGC AAGATTGCGG TGTTGATCTC GCATCGCTTC TCAACAGTGC GCATGGCAGA CCGGATCGCG GTGATTGAGA ACGGGTGCAT TACCGAGATC GGTTCGCACG CTGAATTGCT GCGGCAGGGC GGAACGTATG CCCGCCTGTT CGAGATGCAG GCGGAAGGGT ATCGCTGA
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Protein sequence | MLEVSGGRRG RRPFEPEPAR TWSERLAQVR TAFGNIPGAF RLVWRADRRS TLVMAALTLV AAALPAAQAW AGALIVDTVV DSFTARVDPL AGLERTLPYL GFELALLLIG AAAAQMRMFY EHVLNARLGH AINVDIIRKA LSLDLSYFED ASFYDKLQNA RREADFRALG IINGSYSVVQ NLLTLLSFAV LLLAFNPWIT LVLFGATIPA FVAQGRYSHL YFRLLTWHAP EFRRMQYLEH VLTVDSSVKE VKLFGLGEPL LKRYSDTFQV FFCEDVDLAR RRSLISVGWG VIANLSYYGA YAWIVFVTIA GTITLGSMTL YLTLFRQSQS AFQSLFSNVT RLYENGLFMD NLFSFLSLQP HMSRATQPVA VPPRLQRGLE FRNVSFRYPG RDDWALRNIN LTIAPGEKLA LVGPNGAGKT TLIKLLTRLY DPTEGEILLD GVDLRDYDID EVRRRIGVIF QDFVKYQLSA RENIGFGQID RLDDESRVRE AAQRGGADDI IAELPAGMET MLGRWFENGF ELSGGQWQKI ALSRAFMREG EVLVLDEPTA ALDAEREYEI FQRFRELTAG KIAVLISHRF STVRMADRIA VIENGCITEI GSHAELLRQG GTYARLFEMQ AEGYR
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