| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0641 |
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| Symbol | |
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| ID | 5207579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 791447 |
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| End bp | 794347 |
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| Gene Length | 2901 bp |
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| Protein Length | 966 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640594258 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001275011 |
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| Protein GI | 148654806 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.249187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACC ATCGTCGACT CGCCATCCTC ACCAGGCTCC GCAAAGCGGC GCGCGTGACC
CTGGCGCAGA TGGCCCGCGC CTGCGGTCTG GAGGGCAGCC GGGCCTATGA GTCGGTGAGC
GCCTGGGAGC GCGGCGAAGC CGTGCCGCGC GCTGCCGTTC GCACCGCATT TCTCGGCTAT
CTCGCGCACA CGCTCAACCT GGCCGACGAT CGTGAGACCC TTGCTGCGGT CTGGGAAACG
CTTGTGCACG AGTGGGGCTG GGAGCCGCTG CAGCCCGCCG ACTGGCAGTT GCTGGACTCA
GGGCAGCTTT TGGCCAGTGC GACGCCCGGG CGCTACCAAC TCACCAGGTC TGACTCGACG
AGCACCGGCG CGCCGCTCCC GGCGCACCTT TCGCCCGCGC CGGTTCCGCT CCCTCCCGGC
TCGCGCGCGC CCTTTGCGCC AAACCCGCAT TTTGTCGGCC GCGCCGCCGA GCTGCTGACC
ATCGCCGGGC ATCTGCACCG CCGCACGGCG CCGATCCACA TCGTCGTCTG CGGTCCCGGC
GGCATCGGCA AGACCCAGCT GGCGATTGAG ATCGTCCATC GTTGTGGTCA CGCCTTCCCC
GGCGGCGTCT TCTGGCTGGG CTGCGCCGAC CCCGCCGCTG TCCCGGCCGC GATTGCGGCC
TGCGGCGGGC AGGATGGCCT GCGCCTCCGT CCTGATTTCG ACCGGCTCAG TCTCGACGAG
CAGGTGCGAC TGGTGCTGGC GGCCTGGCAT GAGGAGACGC TGCGCCTGCT GGTCTTCGAC
AGCTGCGAGG ACCCGGCGCT GCTCCGCCGC TGGCTGCCGC GACGGGGCGG CTGCCGCGCG
CTGATCACCA GCCAGCGCCG CACCTGGGAC GCCGACCTGC CGGTGGCGAC GCTGCCGCTC
GGCTTGCTGA GCCGCGCCGA GAGCCTGGCG CTGCTGCGTC GCTACTGCCC GACGCCCCAG
ATCAGCGATG CGGAGCTGAT TGCGATCGCG GCCGAGCTCG ACGACCTGCC GCTGGCCCTG
CACCTGGCTG GCAGTCACCT GGCGCGCGGC GCCGATACGC TCACGCCGAC CTGCTACCTC
GCTGAGCTGC GTGCGCGGCT TGACCAGCAC CCGTCCCTGG CTGGCGTCGA CCCGCGCGGC
CGCCCGCTGC CAGCGCCGAC CGGTCACCAT AACCGGCTCG AACAGGTCGT CGCCCTCAGT
CTGTCGCGGC TCGATCCGGG CGGCGTGATC GACGCGCTCG CCTGCCAGCT CCTGTTGCGT
GCCGCGTGGT TCGCCCCCGG TGAGCCGATC CCAGGCGCGC TGCTCAGCGC CACGCTGGCG
CCCCGACCAG ACCCTGCGCT GCTTGCCGGC GCCCTCCAGC GGCTCGTGGA CATCGGCCTG
CTGCTCGATA GCGCCGGAGC GTACAGCGGT CGCCTGCACC GCCTGATAGC CGCCTTTCTC
CGCCGCCTCG ACAACGATGG GGCGGCGCAG CACGCCGTCG AGACGGCGCT GCTGGCCCAC
GCGCGGATGC TCAACGCCGC GCTCGATCAG CCGGCCCTGC TGCGCATCCA GGCGCATCTG
CGCGCGGTCA CCGACGCTGC GCTCGTGCGC GGCGATGCGA TCGCCGCCGA CCTGAGCTAC
GAACTGAGCC GCCATCTCGG CGAGATTGAC CAGTATGCAG CGGCGATTGC CTACAACCAG
CGCTCGCTGG ACCTGCGGAA TCAGATCTTC GGCGCCGACT CCGTGGCAAG CAGCGCGAAC
CTGCATTTTC ATGGGATGAT GCTGGATTGG CTGGGCGATT ACCCCGGCGC ACGCCCGTAC
CACGAGCGGG CGCTAGCGAT CCGGCGCGCG CGACTGGGGC CTGATCATCC TGATACCGCC
ACCAGCGTGC TGCACGCCGG CGAAATCGCC CATGCAGTCT GCGACTATGC GCAGGCGCGC
ACCTACTACG AGCAGGCGCT GGCGGCCCGT ATCAGGCATG ACGGCCCGGA TAGCCCAGGG
GCGGCGGAGC TCTACAACAA CCTGGGGCTC TTGCTTAACG CGATGGGCGA GTTTGATGCC
GCCCTACCCT ACGCGGAGCG CGCGGTGGCG ATCTGGGAAG CGCATGAGCA GCCCAATCGC
TCGCTCCAGT CAATGGCGAT CAACAACCTG GGCTACCTCC ACCGGGCCCG GGGCGAATAC
CGGCAGGCGC TGCCCCTCCT GCGCCGCGCG CTGGCGATCC GCGAGGAGGT CTACGGTCCG
ATGCATTCCT TCGTCGGCGT CACGCGCAAC CATATCGGGC GGGTCTACCA CTACCAGGGG
CGATTTGAGC AGGCCGGGGC GGAGCTTGAG GCAACTCTCC GGCTCTTCGA CGCCGCCATC
GGGCGCGAGC ACCCGATCAC GGCCTGTGCG CTCAGCAACC TGGGCATGCT GGCGCTGGAG
ATGGGCGACC GCGCCGGTGC GCGCCGGATG CTGGAAGCAG CGCTGGATAT CCATCGCCGG
ATCCTGGGCG CTGCGCATCG CCACACCGCG CGCGAGATGA ATCGGCTCGG GTTGCTCCAC
CAGGCGTTTG GGGATCGCGC GATGGCCACT CGTTACCTGC GCGCCGCGCT GGCTGTTCGC
CGACGCATCC TGGGCGATCT GCACCACGAT ACCGCCAATA CGCTGGGGCA CCTGGGCGTG
CTGCTGCTGA GCGCCGGACG ACCACGGCAG GCCCGGCCGC TGCTCGCTGC GGCGCTGCGC
CGCCATCTGG CCCGCCTGGG TGAGCGCCAC CCGTACACTG CGCGCAGCCT GCTGCGCATG
GGCCAGGTCT GCGCTGCACT TGGGGAACGA GAGATCAGTC GTGACTATCT GAGCCGGGCG
CTTGCTGTGT ACACCGCTGT GCTTGGCGCC GATCACCCGT ACACCCTGGC AGCGCGGCAG
GCTCAAGTTA CGGCGTGCTG A
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| Protein sequence | MPDHRRLAIL TRLRKAARVT LAQMARACGL EGSRAYESVS AWERGEAVPR AAVRTAFLGY
LAHTLNLADD RETLAAVWET LVHEWGWEPL QPADWQLLDS GQLLASATPG RYQLTRSDST
STGAPLPAHL SPAPVPLPPG SRAPFAPNPH FVGRAAELLT IAGHLHRRTA PIHIVVCGPG
GIGKTQLAIE IVHRCGHAFP GGVFWLGCAD PAAVPAAIAA CGGQDGLRLR PDFDRLSLDE
QVRLVLAAWH EETLRLLVFD SCEDPALLRR WLPRRGGCRA LITSQRRTWD ADLPVATLPL
GLLSRAESLA LLRRYCPTPQ ISDAELIAIA AELDDLPLAL HLAGSHLARG ADTLTPTCYL
AELRARLDQH PSLAGVDPRG RPLPAPTGHH NRLEQVVALS LSRLDPGGVI DALACQLLLR
AAWFAPGEPI PGALLSATLA PRPDPALLAG ALQRLVDIGL LLDSAGAYSG RLHRLIAAFL
RRLDNDGAAQ HAVETALLAH ARMLNAALDQ PALLRIQAHL RAVTDAALVR GDAIAADLSY
ELSRHLGEID QYAAAIAYNQ RSLDLRNQIF GADSVASSAN LHFHGMMLDW LGDYPGARPY
HERALAIRRA RLGPDHPDTA TSVLHAGEIA HAVCDYAQAR TYYEQALAAR IRHDGPDSPG
AAELYNNLGL LLNAMGEFDA ALPYAERAVA IWEAHEQPNR SLQSMAINNL GYLHRARGEY
RQALPLLRRA LAIREEVYGP MHSFVGVTRN HIGRVYHYQG RFEQAGAELE ATLRLFDAAI
GREHPITACA LSNLGMLALE MGDRAGARRM LEAALDIHRR ILGAAHRHTA REMNRLGLLH
QAFGDRAMAT RYLRAALAVR RRILGDLHHD TANTLGHLGV LLLSAGRPRQ ARPLLAAALR
RHLARLGERH PYTARSLLRM GQVCAALGER EISRDYLSRA LAVYTAVLGA DHPYTLAARQ
AQVTAC
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