Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0616 |
Symbol | |
ID | 5207554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 764364 |
End bp | 765590 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640594235 |
Product | peptidase M24 |
Protein accession | YP_001274988 |
Protein GI | 148654783 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0006] Xaa-Pro aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.886156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0599138 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAAGCG ATCTTGACCG ATTGATGGCG GAACGCAACC TGGACGCCAT CGTTGTCGAA GGACCCGACG GCTTAGAGAG CGCCAATCCC GACTACAATT ACTTCGTCGG CGGGCGACAC ATTCCCGGAC TGATCATCAA AAAGCGTGGC GAACCCGCCA TGCTGTTGCA CGGTCCCTGG GAACAGAACG AAGCCGAACA GACCGGGCTG ACGCTCGTGT CGCTCAACCG CTGGAACATA CGCGAGATTC TCCAGCAGTT TCCCGACCGC CTGGAGGCGC GGGTGGAGCA GCGCCGCCGC ATCTTTGCCG ATCTCGGCGT CCGGGGGCGG GTCGGCATTT ACGGGACGGT CAGGGCAGGT CCCTTCTTCG CACTTATGAC GCGCCTGGCG CAGCAGATCG ATGGACTGGA GATCGTCGCC GAACTCGACC GGGACGTTAT TTCGATGGCG CGGTTGACCA AAGATGTGGA TGAAATCGAG CGCATGCGCG CCGTCGGGCG CAAGACGTGC GCAGTGTTGC AGGCGGCAGT CGATTTCATC AGGGCAGGGC GGATCGACGA CGACTGCGTG CGCGGCGCCG ACGGCGCGCC GCTGACGATC GGCGATGTGC GGCGGTTGAT GCTGCGCGAG ATGGCGGCGC TTGGATTGGA AGCGCCCGCC GGCATGATCA TCGCCCAGGG GCGCGACGCC GGTCTACCGC ATGCGCGCGG CGACGACAGC ATGCCCCTGC GTCCGGGGCA GGCGATTGTC ATCGACATGT TCCCACGCGA AGCGGGCGGG GGGTACTTCC ACGATATGAC TCGCACCTTT GCGATCGGGT ATGCCCCGCC GGAACTCCAG CAGGCTTACG ACGAGGTGCT CGGCGCATTT ACAATGGCAA TGAACGCATT TGAGGCAGGC GCACCGACCA GAACGTACCA GGATATGGTG TGCGCTTACT TCGAGGAGCG TGGTCATGAC ACGATCCGCC GCACTTATCC GATTGAAGAA GGGTACATCC ACTCACTCGG TCATGGGCTG GGGCTGGAGA TCCACGAAGA CCTGAGTTTC TCATCGCTGG TCGACCGGGG CGACACCATC GAACCCGGCG CGGTCTTTAC CGTCGAACCG GGGCTGTACT ATCCGAGCCG GGGGTTTGGC GTGCGGATCG AGGATACCTG CTACTGCACA CCGGACGGGC GCTTCGAGAG CCTGACGCCC TTCCCGAAGG AGTTGGTGAT TGCGTAG
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Protein sequence | MKSDLDRLMA ERNLDAIVVE GPDGLESANP DYNYFVGGRH IPGLIIKKRG EPAMLLHGPW EQNEAEQTGL TLVSLNRWNI REILQQFPDR LEARVEQRRR IFADLGVRGR VGIYGTVRAG PFFALMTRLA QQIDGLEIVA ELDRDVISMA RLTKDVDEIE RMRAVGRKTC AVLQAAVDFI RAGRIDDDCV RGADGAPLTI GDVRRLMLRE MAALGLEAPA GMIIAQGRDA GLPHARGDDS MPLRPGQAIV IDMFPREAGG GYFHDMTRTF AIGYAPPELQ QAYDEVLGAF TMAMNAFEAG APTRTYQDMV CAYFEERGHD TIRRTYPIEE GYIHSLGHGL GLEIHEDLSF SSLVDRGDTI EPGAVFTVEP GLYYPSRGFG VRIEDTCYCT PDGRFESLTP FPKELVIA
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