Gene RoseRS_0616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0616 
Symbol 
ID5207554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp764364 
End bp765590 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content63% 
IMG OID640594235 
Productpeptidase M24 
Protein accessionYP_001274988 
Protein GI148654783 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.886156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0599138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAGCG ATCTTGACCG ATTGATGGCG GAACGCAACC TGGACGCCAT CGTTGTCGAA 
GGACCCGACG GCTTAGAGAG CGCCAATCCC GACTACAATT ACTTCGTCGG CGGGCGACAC
ATTCCCGGAC TGATCATCAA AAAGCGTGGC GAACCCGCCA TGCTGTTGCA CGGTCCCTGG
GAACAGAACG AAGCCGAACA GACCGGGCTG ACGCTCGTGT CGCTCAACCG CTGGAACATA
CGCGAGATTC TCCAGCAGTT TCCCGACCGC CTGGAGGCGC GGGTGGAGCA GCGCCGCCGC
ATCTTTGCCG ATCTCGGCGT CCGGGGGCGG GTCGGCATTT ACGGGACGGT CAGGGCAGGT
CCCTTCTTCG CACTTATGAC GCGCCTGGCG CAGCAGATCG ATGGACTGGA GATCGTCGCC
GAACTCGACC GGGACGTTAT TTCGATGGCG CGGTTGACCA AAGATGTGGA TGAAATCGAG
CGCATGCGCG CCGTCGGGCG CAAGACGTGC GCAGTGTTGC AGGCGGCAGT CGATTTCATC
AGGGCAGGGC GGATCGACGA CGACTGCGTG CGCGGCGCCG ACGGCGCGCC GCTGACGATC
GGCGATGTGC GGCGGTTGAT GCTGCGCGAG ATGGCGGCGC TTGGATTGGA AGCGCCCGCC
GGCATGATCA TCGCCCAGGG GCGCGACGCC GGTCTACCGC ATGCGCGCGG CGACGACAGC
ATGCCCCTGC GTCCGGGGCA GGCGATTGTC ATCGACATGT TCCCACGCGA AGCGGGCGGG
GGGTACTTCC ACGATATGAC TCGCACCTTT GCGATCGGGT ATGCCCCGCC GGAACTCCAG
CAGGCTTACG ACGAGGTGCT CGGCGCATTT ACAATGGCAA TGAACGCATT TGAGGCAGGC
GCACCGACCA GAACGTACCA GGATATGGTG TGCGCTTACT TCGAGGAGCG TGGTCATGAC
ACGATCCGCC GCACTTATCC GATTGAAGAA GGGTACATCC ACTCACTCGG TCATGGGCTG
GGGCTGGAGA TCCACGAAGA CCTGAGTTTC TCATCGCTGG TCGACCGGGG CGACACCATC
GAACCCGGCG CGGTCTTTAC CGTCGAACCG GGGCTGTACT ATCCGAGCCG GGGGTTTGGC
GTGCGGATCG AGGATACCTG CTACTGCACA CCGGACGGGC GCTTCGAGAG CCTGACGCCC
TTCCCGAAGG AGTTGGTGAT TGCGTAG
 
Protein sequence
MKSDLDRLMA ERNLDAIVVE GPDGLESANP DYNYFVGGRH IPGLIIKKRG EPAMLLHGPW 
EQNEAEQTGL TLVSLNRWNI REILQQFPDR LEARVEQRRR IFADLGVRGR VGIYGTVRAG
PFFALMTRLA QQIDGLEIVA ELDRDVISMA RLTKDVDEIE RMRAVGRKTC AVLQAAVDFI
RAGRIDDDCV RGADGAPLTI GDVRRLMLRE MAALGLEAPA GMIIAQGRDA GLPHARGDDS
MPLRPGQAIV IDMFPREAGG GYFHDMTRTF AIGYAPPELQ QAYDEVLGAF TMAMNAFEAG
APTRTYQDMV CAYFEERGHD TIRRTYPIEE GYIHSLGHGL GLEIHEDLSF SSLVDRGDTI
EPGAVFTVEP GLYYPSRGFG VRIEDTCYCT PDGRFESLTP FPKELVIA