Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0590 |
Symbol | |
ID | 5207528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 738156 |
End bp | 739391 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640594209 |
Product | hypothetical protein |
Protein accession | YP_001274962 |
Protein GI | 148654757 |
COG category | [S] Function unknown |
COG ID | [COG1641] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00299] conserved hypothetical protein TIGR00299 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.297044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000815956 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCGCGTG TTATCTATTT CGACTGTTTT TCCGGCGTCA GCGGTGATAT GGCGCTCGGC GCGCTGATCG ACGCCGGGGT GTCGCTCGAT GACCTGCGAG CGATGCTGCA ACGGCTCGGC GTTGGCGGAT GGGAATTGCA CGCCTCGCGC GAGGTGCGCG GTCCGCTCGC CGGCACACGC GCCCACGTCG TTGCTCCAGA GGATCATCAT CACCGCACCC TCACCGACAT TCGCGCCCTG ATCGCCGGCG CACCCCTGCC ATCGGCAGTC GTTGAGCGGA GTATCCGCAT CTTCACCCTT CTCGCCGAGG CAGAGGCGCG CGTCCACGGG ACGACCGTCG ATCAGGTCCA TTTCCACGAG GTCGGCGCAC TCGATGCAAT TGTCGATATT GTCGGCGTGG TTGCGGGTCT CGATCTCCTC GGCGTTGAAC AGGTCTTCGC GTCACCGATT CCGCCCGGCG CCGGATGGGT CCGCAGCGCG CATGGTCCCA TCCCGGTTCC CGCACCGGCC ACGCTGGCGC TGCTGGCGTC CGTCGGAGCG CCGGTGACCG CCGATGAGAC CCCATTTGAA CTGACGACGC CGACCGGTGC GGCGATCCTG GCAGCGCTGG CAACCTTCCG TCGCCCACCC ATGCGCCTGC GGGCAGTTGG ATACGGCTTT GGCGCGCGCC GGATGGAACG TCCGAATGCG CTGCGCGTCT GGCTCGGCGA CATGGATGAT GAGACAGATG TTGATCAGGA TCGCCAGGAT CGAACGTCAG CAGAACACGC CGGTTCAGGC GAATCGTCGC CGGTGCTGCT GGAGACGAAC ATCGACGACC AGCCAGCCGA ACAGATCGCA TATGTCACAG AGCGGCTACG CGAAGCAGGG GCGCTCGATG TCTGGTGCAC GCCGATCATG ATGAAAAAAG GACGCGCTGG TGTCCTGATC GCAGCGCTTG TACCGGCAGA CCTGGAAGAT CGGATGGTCA CAATCCTGCT GCGCGAAACG ACGACACTCG GAGTGCGGCG GCGCGCTGTT GAGCGCTATG TGTGCGCACG CGACATCATC ACGGTGACCA CGCCGCTCGG ACCGGCGCGT GTCAAACGAA AGTGGTGGCG CGGCGAACTG ATCGGTGCGG CGCCGGAGTA CGAAGATTGC GCCCGGATCG CGCGCGAACG CGGCGTACCG CTGACGACGG TGTATCAGAC GGTGATGGGT CGGTTGGAGG ACGCATCGTC TGTCACGGAG CATTGA
|
Protein sequence | MPRVIYFDCF SGVSGDMALG ALIDAGVSLD DLRAMLQRLG VGGWELHASR EVRGPLAGTR AHVVAPEDHH HRTLTDIRAL IAGAPLPSAV VERSIRIFTL LAEAEARVHG TTVDQVHFHE VGALDAIVDI VGVVAGLDLL GVEQVFASPI PPGAGWVRSA HGPIPVPAPA TLALLASVGA PVTADETPFE LTTPTGAAIL AALATFRRPP MRLRAVGYGF GARRMERPNA LRVWLGDMDD ETDVDQDRQD RTSAEHAGSG ESSPVLLETN IDDQPAEQIA YVTERLREAG ALDVWCTPIM MKKGRAGVLI AALVPADLED RMVTILLRET TTLGVRRRAV ERYVCARDII TVTTPLGPAR VKRKWWRGEL IGAAPEYEDC ARIARERGVP LTTVYQTVMG RLEDASSVTE H
|
| |