Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0586 |
Symbol | |
ID | 5207524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 733932 |
End bp | 735089 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640594205 |
Product | hypothetical protein |
Protein accession | YP_001274958 |
Protein GI | 148654753 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0370904 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTTC TGTTCATTCT CGCTATCGTC CTGCGCAGCG AGTTGTTCTT CTATTTGCTC TATCTGATCG CGGGATTGCA TATCGCCGCG CGCTGGTGGG TCGGGCGCAG CGCGTCCCGG TTGCGTATCC GGCGCGTGGC GCCGGAAGCG GCGTTTCCGG GCGATCCTGT GCCGGTTCTT GTCGAAGTGC AGAATACCGG TCTTCTGCCT CTTCCCTGGC TCGCCCTGCG CGAAACGCTG CCACCGGCGC TGCATTCACC GCCGATGGTG TACGAGGTGA TGTCGCCTGG CGCCGCTGAA CGTTGCGAGA TGCGCTACAC GCTTTTCAGC CGACGGCGGG GATACTATCA GATCGGTCCG CTGACGGCGC AGACCGGCGA TGTGCTCGGG ATCGGCGAAC GCACCGTGAG CGAAGTGCCA CCCGCAGCGC TGACAATCTA TCCCAACGTG CTGCCGCTCG AAGACCTGGG ATTGCCAGCG TCGCTCCCGT TCGGCACGCT GCCTGCAACA CATCGACTGT TTACCGATCC CGCGCGTCCA ATGGGCGTAC GACCATATCA ACCGGTCGAT GGGGTGCGGC GGATCGATTG GAAGGCTACA GCGCGGCTCG GCGAACCGCA GGTGCGTCGC TATCAACCGG CGATTGCTGT CGAAACGATG ATTGCGCTGG CGTTCTCGCG CGCCGAATAC GGTGGCGGCT TTGCGTATGA TACGATGGAA CGCGCCGTGG TGGCTGCGGC GTCGATCGCT GCCCATCTGA TCGAGCGGCG ACAATCGGTT GGTCTGTGCA CCACTGGCTT TGATGCCGCC AGTCACGCCC CCGTCGGCAT TCTGCCGCCT GGATCGGGGC GAGCGCATCT CATTCAGGTC CTCGGTCTGC TGGGGCGACT CGAAGTGGCG AAAGAGGGCG ATCTGGCAGT CACCCTCTCC CGTGCCACTG TCGGGTTGGG ATGGGGGAGC ACAGTGGTCA TGATCACCGG ACAGCGTGCG CGCGACATGC TGCCGCATGC GCTGGCGCTC CGGCAGCGCG GGTTGAATGT CGCACTGGTG ATTGCCGAAG CGCTGACCGA TGACCTTGCG CTGGCGCATC GACACGGGGT GGCGGCATAC GATCTGGGGC GTGACGCGCG CCCCATACAG GCAGTGAGCA CACCGTAA
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Protein sequence | MIVLFILAIV LRSELFFYLL YLIAGLHIAA RWWVGRSASR LRIRRVAPEA AFPGDPVPVL VEVQNTGLLP LPWLALRETL PPALHSPPMV YEVMSPGAAE RCEMRYTLFS RRRGYYQIGP LTAQTGDVLG IGERTVSEVP PAALTIYPNV LPLEDLGLPA SLPFGTLPAT HRLFTDPARP MGVRPYQPVD GVRRIDWKAT ARLGEPQVRR YQPAIAVETM IALAFSRAEY GGGFAYDTME RAVVAAASIA AHLIERRQSV GLCTTGFDAA SHAPVGILPP GSGRAHLIQV LGLLGRLEVA KEGDLAVTLS RATVGLGWGS TVVMITGQRA RDMLPHALAL RQRGLNVALV IAEALTDDLA LAHRHGVAAY DLGRDARPIQ AVSTP
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