Gene RoseRS_0586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0586 
Symbol 
ID5207524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp733932 
End bp735089 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content64% 
IMG OID640594205 
Producthypothetical protein 
Protein accessionYP_001274958 
Protein GI148654753 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0370904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTTC TGTTCATTCT CGCTATCGTC CTGCGCAGCG AGTTGTTCTT CTATTTGCTC 
TATCTGATCG CGGGATTGCA TATCGCCGCG CGCTGGTGGG TCGGGCGCAG CGCGTCCCGG
TTGCGTATCC GGCGCGTGGC GCCGGAAGCG GCGTTTCCGG GCGATCCTGT GCCGGTTCTT
GTCGAAGTGC AGAATACCGG TCTTCTGCCT CTTCCCTGGC TCGCCCTGCG CGAAACGCTG
CCACCGGCGC TGCATTCACC GCCGATGGTG TACGAGGTGA TGTCGCCTGG CGCCGCTGAA
CGTTGCGAGA TGCGCTACAC GCTTTTCAGC CGACGGCGGG GATACTATCA GATCGGTCCG
CTGACGGCGC AGACCGGCGA TGTGCTCGGG ATCGGCGAAC GCACCGTGAG CGAAGTGCCA
CCCGCAGCGC TGACAATCTA TCCCAACGTG CTGCCGCTCG AAGACCTGGG ATTGCCAGCG
TCGCTCCCGT TCGGCACGCT GCCTGCAACA CATCGACTGT TTACCGATCC CGCGCGTCCA
ATGGGCGTAC GACCATATCA ACCGGTCGAT GGGGTGCGGC GGATCGATTG GAAGGCTACA
GCGCGGCTCG GCGAACCGCA GGTGCGTCGC TATCAACCGG CGATTGCTGT CGAAACGATG
ATTGCGCTGG CGTTCTCGCG CGCCGAATAC GGTGGCGGCT TTGCGTATGA TACGATGGAA
CGCGCCGTGG TGGCTGCGGC GTCGATCGCT GCCCATCTGA TCGAGCGGCG ACAATCGGTT
GGTCTGTGCA CCACTGGCTT TGATGCCGCC AGTCACGCCC CCGTCGGCAT TCTGCCGCCT
GGATCGGGGC GAGCGCATCT CATTCAGGTC CTCGGTCTGC TGGGGCGACT CGAAGTGGCG
AAAGAGGGCG ATCTGGCAGT CACCCTCTCC CGTGCCACTG TCGGGTTGGG ATGGGGGAGC
ACAGTGGTCA TGATCACCGG ACAGCGTGCG CGCGACATGC TGCCGCATGC GCTGGCGCTC
CGGCAGCGCG GGTTGAATGT CGCACTGGTG ATTGCCGAAG CGCTGACCGA TGACCTTGCG
CTGGCGCATC GACACGGGGT GGCGGCATAC GATCTGGGGC GTGACGCGCG CCCCATACAG
GCAGTGAGCA CACCGTAA
 
Protein sequence
MIVLFILAIV LRSELFFYLL YLIAGLHIAA RWWVGRSASR LRIRRVAPEA AFPGDPVPVL 
VEVQNTGLLP LPWLALRETL PPALHSPPMV YEVMSPGAAE RCEMRYTLFS RRRGYYQIGP
LTAQTGDVLG IGERTVSEVP PAALTIYPNV LPLEDLGLPA SLPFGTLPAT HRLFTDPARP
MGVRPYQPVD GVRRIDWKAT ARLGEPQVRR YQPAIAVETM IALAFSRAEY GGGFAYDTME
RAVVAAASIA AHLIERRQSV GLCTTGFDAA SHAPVGILPP GSGRAHLIQV LGLLGRLEVA
KEGDLAVTLS RATVGLGWGS TVVMITGQRA RDMLPHALAL RQRGLNVALV IAEALTDDLA
LAHRHGVAAY DLGRDARPIQ AVSTP