Gene RoseRS_0506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0506 
Symbol 
ID5207443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp640464 
End bp641741 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content63% 
IMG OID640594126 
Productglycosyl transferase, group 1 
Protein accessionYP_001274880 
Protein GI148654675 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAC GATCCCCTTC CGATGCACTG CGCGTCGCCA TGCTGGCGCG CGTCGTCTTT 
CCACTGCACG GATTCGGCGG CATCGAACGC CATGTCTTCC ATCTGACGAC CCACCTGGCG
CGGCTTGGCG TGCGGGTGAC GCTGTATGTG CAGACACCGG GCGCACCATC GCACAACCAC
ACCCCTGATC GCGCCAATCC GTATGCCGAT GCGCTGCCGG GCATCGAGCG CGTGATCACG
CTGCGGTACG ACTACACATC GCCGCTGCTG CGCCCAAACT CCATTTCAGG ACGACAGATC
AACTATCCCT GGTATTCCTG GCGATTGGGG CGAATGGCGG CAATCGCTGC ACGACGCGGC
GCATACGATG TGGTTCATGC CCAGGGATTA TGTGCGTTCG GCTACGGCTG GATCCGCGTC
CGCGACCCGC TGTTGCGTCG CCTGCCGTTC ATCGCCAACC CGCATGGGCT GGAAGAGTAT
CGCACACCCG ATTGGCGCAA GTGGCTGGCA TATGCGCCCT TTCGAGCGCT CTACTCCTAC
GGCGCACGTT GTGCCGACCG TGCCATCGCA ACCGATGCCT GTACACGGGA CGACCTGCCA
CGCTATCTGG GCGTCGATCC GGAGCGGGTT GTGGTTATTC CCAGCGCCAT CGACGCCGAT
GAATGCCTGG CGCCGGTCAA CGACATCGTG CGTGCGCGGC TGCGCGAACG GCTGCGCCTC
GATGACGCCG ACCTGACCAT CCTCAGCGTT GGGCGGCTGG AGCGCAACAA AGGGTATCAC
GTGCTGATCG AGGCGCTTAC CCGTGTGCGC GATCATCTTC CACCGAACTG GCGCTGGCTG
CTGGTGGGCG AAGGGAAAGA ACGAACCGCG CTGGAACAAC AGGCGCGACA GGCTGGCATT
GCCGGACATA TCACCTTCGT CGGGCGCCTC AACGACACCG AATTGCACAA CCTCTACGAG
GAGATCGATC TGGTGGTGCA TCCGACCCTT TATGAAGGCT CATCGCTCGT GACCCTGGAA
GCCATGATCC ACCGCCGCCC CATCGTCGCA TCGGCGGCAG GCGGCATTCC CGACAAAGTG
TTCAACGGGC GCAACGGCTA TCTGGCTCGT CCAGGCGATG CCGCCGATCT GGCGGCAAAG
TTGCGCCTCG CTCTCGAACA GCGCGACCAA TGGGCAGCCT GGGGCGAAGC GAGCGTCCGT
CTGGTGCGCG AAACATTCGA CTGGCCCATC GTTGCGCGCC GGACGAAGCA GGAGTATGAG
CATCTGGTTG CAGGTTGA
 
Protein sequence
MSERSPSDAL RVAMLARVVF PLHGFGGIER HVFHLTTHLA RLGVRVTLYV QTPGAPSHNH 
TPDRANPYAD ALPGIERVIT LRYDYTSPLL RPNSISGRQI NYPWYSWRLG RMAAIAARRG
AYDVVHAQGL CAFGYGWIRV RDPLLRRLPF IANPHGLEEY RTPDWRKWLA YAPFRALYSY
GARCADRAIA TDACTRDDLP RYLGVDPERV VVIPSAIDAD ECLAPVNDIV RARLRERLRL
DDADLTILSV GRLERNKGYH VLIEALTRVR DHLPPNWRWL LVGEGKERTA LEQQARQAGI
AGHITFVGRL NDTELHNLYE EIDLVVHPTL YEGSSLVTLE AMIHRRPIVA SAAGGIPDKV
FNGRNGYLAR PGDAADLAAK LRLALEQRDQ WAAWGEASVR LVRETFDWPI VARRTKQEYE
HLVAG