| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0484 |
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| Symbol | |
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| ID | 5207420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 612787 |
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| End bp | 615840 |
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| Gene Length | 3054 bp |
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| Protein Length | 1017 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640594103 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001274858 |
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| Protein GI | 148654653 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain
[COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGA CGCTCGCACT TGATATTGGC GGTGCAGATA TCATTCAACG ACTCTGCGTT
GATCTGTCTC AGGCAACAAA TCTTGAGGCG GGCATTCTGA GCGTTGTCAC CACTATCGAG
CGAAGCCTGG CGCCGCGCGA TTGCCAGGTC ACGCTTCTGC TGGCAGGCGA GCCGCGTTTG
TTGCGCGGCG TCGGACCGGT GCGCATACCC GATGATACCC AACGCGCCGC GCTGCGTGAA
GGAGAGATCG TCGTTGTACC GCAGAGCGAA GCGGGTATGA TCTGTTTTGC CCCGCTACGC
GCGCGTCGCG CCTTGATCGG CTGGATCTGC CTGATCGACC CGACATGGTC ACCGGAACAC
GAATCGTTGT TGCGGATGAT TGCCGGGCAG TCGGGTCCTG CCCTTGCGCT GCTGGGCAAT
ATCGGCCGGC GCGACGATCA GGCGGCGCAG TTGCAAACGC TGAACGAGAT CGGGCGGTTG
ATCAGCAGCG CCTTCGATCT CACCCAACTG TTCACCGCCA TCCACGCAGT GGTGCAGCGT
GTCGTCGAAG CCCCGACCTT TCTGATTGCG CTGTACGATG CACAGACTGA GGAACTCGAA
CCGGTTTATT TGATCCACGA AGGACGCCCA CAACCCACGA ATGAGCGATG GTCAAAAGAT
GTCGGACTTG CAGGAGTGGT GGTTCGGGAA CGACAACCGC TCTGCGTCAG CGATTACGCG
AAAGAGTGCG AACGGCGCGG CGTGCAACCG CAGATGCTCG ACGGTCGGAT CCCCGGTCCG
GCATGGGTTG GTGTGCCCCT CATTGCGCAC GACCGGTTGA TCGGCGTCAT TGTGCTGGCG
AGTTCGCGCG CAGGGTATGT CTATCGCCAG GAACACGTAA ACCTGCTGAT GACGATAGCA
GCGCATGCCG CCGTTGCGCT CGACCGCGCC TGGCTGTATG AGCGCGCTGA GCGTCAGGCG
CAGCAACTGC TGGTGCTGAA CCGCATCGGT CGCATCATCA CATCGTCGAT CGACCCGCAG
CAGGTGCCGG ACATTATTCT GCGGCAGGTG ACCGAACTGC TGGACGCCGA GGAGAGTTCG
TTGCTCCTGA CCGACGATCA TACCGGCGAA ATGGTGTTCG CCTATACGAC CGGTCAGGTG
GGGAAGCGGA TCCTTGGTCA ACGGTTGCCG CGCGGCGTCG GTATTGCCGG GTATGTCGCC
GCCACCGGGC AATCGGTGAT CGTCAATGAT GTGCAGTCAG ATGAGCGCTT CTACCGGTCG
ATGGATCTTT CGACCGGATA TACGACCCGC ACACTGCTGG CTGTACCGTT GCGCGGCGTC
GGGGGGGTGG AAGGGGTCAT TGAAGTGCTC AACCGGCGCG ATCTGCGACC GTTTACGGTC
GAGGATCAGC GTCTGCTCGA GGCGCTGGCG GATTACGCCG TTATTGCCCT GGAAAACGCC
CGCCAGTTCC AGAAGATCGA CCAGGCGCTG GCGCGACGCG CTCAGGAACT GGCGCGCACC
AACGAGCAAC TGCAACAGCA CCTGCGCAGC CTGACGGCGC TCAATGCGTT CGGTATGGCG
ATCAACACGA CACTGCGCAG CCCGCACGAA ATACTGAGCA TGACGGCGCG CGGCATCGCC
GAGATGACCG GCGCCATCGG TGCAATGGCG CTGCTTCCCG ATGGCGAGAT CATGCGGCCG
GTTGTCTCGA TTGGCTTGCG CATGCCGCTC GATGAACGCA TGCTGAACGT CGTTCACCGG
GTTATCGCTA CCGGTCGTCC TGATACGCTG CCGCCCGACC CGGAAGCGCC GGGGCGCGCG
CCGCGTTGTG TCGTGCTGAT CGTCCCATTA CGCGCAACGC AGCGCACCCT CGGCTGTGTC
TGCGTGGCCT ATACCAATGC CCTGCCCGAA CCTTCTGACC GTGAAACGGT GATCCTGTTC
GCCTCCCAGG CGGCGGTCGC TATCGAAAGC ATCGATCTCT TCATGGCGGT CCGCACAGCG
CGTGACCAGA TGGCGTCAAT TCTGGCATCG ACGCGCGAAG GTATTCTGTT GATCGACACG
GATGGCACCG TCGCTGTGGC GAATGCTGCC CTCTCCGATC TGACAACACT CGATGCCAGC
ATCATCCATG GATTGCCGAT CGATGCGTTC CTGTCGCGCT GGTTCGAGGC AGCAGCATAT
GAAACCGAAG AATGTGCGGC GCTTCAGCGC GGTATTGATG ATGTGCTGAC CGGTACCGCG
CAGTTCGTTG CTGGCGAATT GAGTGGTAGA TCCGGTCAAT TACGTCACCT GGAATGGTCG
GTGCTTCGCG CACAGAGCAG CGGTGATAGT CACGGCGGCG TGCTGCTCGT CTTGCGCGAC
ATTACTGCCA CAAAAGAAGC AGAACGCATG CGCCATGATC TGACCCACAT GATCGTCCAT
GATCTGCGCA GCCCGCTCTC TGGCGTTATG GCCTCGATCG AACTGATGAT GCGCGGCGTG
CCGGGCAAAC TGAACGATCA GCAGCGGCAT GTGTTGCAGA TCGCCAGCAC CAGTGCAGCG
AATATGCTGG ATATGATTAA CACGCTGCTC GATATCAGTC GACTCGAAGC AGGACGCATG
CCGATCGAGC GCTGTATCGG CAACATACGC GACATTATTC ACGACTCCGT CCAGCGTCTG
GCATCACTTG CACTGGATCG CGCGATCACC ATCCGCACTG AGGTCGAAGA AGACGTTCCT
GACATTTATG CCGATCTCGG ATTGATAAGT CGCATCATCC AGAATCTGGT CAGTAATGCG
ATCAAGTTCA GTCATCGCGG CGGGTTGGTC ACTGTGCGGG CAGCGGTAGA GACAGCCGAT
GATGGTCAAC CCAAAGTCAT CGTCTCGGTC AGCGATCAGG GGGTCGGCAT TGCACCTGGC
GATCGTGAGC GAATCTTTGC CAAGTTCAGT CAGGTGGGCG AGCGACGCGG CGGTACCGGG
CTTGGGCTTG CCTTCTGCCG TCAGGCAATT GAGGCGCACG GTGAGCGCAT CTGGGTCAAT
AGCGAACTGG GGCGCGGTTC GACGTTCTTT TTCACCATTC CTGTCGCGTC GTAA
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| Protein sequence | MNQTLALDIG GADIIQRLCV DLSQATNLEA GILSVVTTIE RSLAPRDCQV TLLLAGEPRL
LRGVGPVRIP DDTQRAALRE GEIVVVPQSE AGMICFAPLR ARRALIGWIC LIDPTWSPEH
ESLLRMIAGQ SGPALALLGN IGRRDDQAAQ LQTLNEIGRL ISSAFDLTQL FTAIHAVVQR
VVEAPTFLIA LYDAQTEELE PVYLIHEGRP QPTNERWSKD VGLAGVVVRE RQPLCVSDYA
KECERRGVQP QMLDGRIPGP AWVGVPLIAH DRLIGVIVLA SSRAGYVYRQ EHVNLLMTIA
AHAAVALDRA WLYERAERQA QQLLVLNRIG RIITSSIDPQ QVPDIILRQV TELLDAEESS
LLLTDDHTGE MVFAYTTGQV GKRILGQRLP RGVGIAGYVA ATGQSVIVND VQSDERFYRS
MDLSTGYTTR TLLAVPLRGV GGVEGVIEVL NRRDLRPFTV EDQRLLEALA DYAVIALENA
RQFQKIDQAL ARRAQELART NEQLQQHLRS LTALNAFGMA INTTLRSPHE ILSMTARGIA
EMTGAIGAMA LLPDGEIMRP VVSIGLRMPL DERMLNVVHR VIATGRPDTL PPDPEAPGRA
PRCVVLIVPL RATQRTLGCV CVAYTNALPE PSDRETVILF ASQAAVAIES IDLFMAVRTA
RDQMASILAS TREGILLIDT DGTVAVANAA LSDLTTLDAS IIHGLPIDAF LSRWFEAAAY
ETEECAALQR GIDDVLTGTA QFVAGELSGR SGQLRHLEWS VLRAQSSGDS HGGVLLVLRD
ITATKEAERM RHDLTHMIVH DLRSPLSGVM ASIELMMRGV PGKLNDQQRH VLQIASTSAA
NMLDMINTLL DISRLEAGRM PIERCIGNIR DIIHDSVQRL ASLALDRAIT IRTEVEEDVP
DIYADLGLIS RIIQNLVSNA IKFSHRGGLV TVRAAVETAD DGQPKVIVSV SDQGVGIAPG
DRERIFAKFS QVGERRGGTG LGLAFCRQAI EAHGERIWVN SELGRGSTFF FTIPVAS
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