Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0453 |
Symbol | |
ID | 5207389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 569477 |
End bp | 570037 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640594073 |
Product | hypothetical protein |
Protein accession | YP_001274828 |
Protein GI | 148654623 |
COG category | [S] Function unknown |
COG ID | [COG3860] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.597962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00422239 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAACACG AAATGCTCAA CTTTGTGAAA GCCCTGTTCC ACGTCGATCG CCTGCGAATG ATTGGCGCGC TGACTACGCA ACAAGGCGCA ACCATCCAGG AATTGGCCCA AAGCCTGAAC CTGCCGTTCC GTGACGTGTT CCACCACCTG ACCTTTTTTG AGCGCCTCGG CGTAGTGCGT AAGCAAAACG ACCTGTACAT CCTGAACCCG GATGGCGTGG ACTCCCTGGC GCGGCGCCAG TTCGATGGCC AGCCGCGCGA ATCCTATACG CCCGCGCCGG ACTTAAGCGA ACAGCGCCGC AAAGTGCTGA AGGCTTATCT CAATGCGGAC GGCTCGCTGA AGCAGATTCC TTCCCAACCA GGCAAACTGC AAATCATTCT CGATTATGTG GTGGAGGCTT TCACGCCTGG CGCGCTTTAC ACCGAAAAGG AAGTGAACAC GCTGATGCGC CGTTTCCACA TCGATACGGC TGCGTTGCGC CGATACCTGG TCGACCGGGG CATGCTGGAG CGTAAAAGTG ACGGTTCGCA ATACTGGCGG ACCGAACCGG AGGCAGAATG A
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Protein sequence | MQHEMLNFVK ALFHVDRLRM IGALTTQQGA TIQELAQSLN LPFRDVFHHL TFFERLGVVR KQNDLYILNP DGVDSLARRQ FDGQPRESYT PAPDLSEQRR KVLKAYLNAD GSLKQIPSQP GKLQIILDYV VEAFTPGALY TEKEVNTLMR RFHIDTAALR RYLVDRGMLE RKSDGSQYWR TEPEAE
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