Gene RoseRS_0453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0453 
Symbol 
ID5207389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp569477 
End bp570037 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content57% 
IMG OID640594073 
Producthypothetical protein 
Protein accessionYP_001274828 
Protein GI148654623 
COG category[S] Function unknown 
COG ID[COG3860] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.597962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00422239 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAACACG AAATGCTCAA CTTTGTGAAA GCCCTGTTCC ACGTCGATCG CCTGCGAATG 
ATTGGCGCGC TGACTACGCA ACAAGGCGCA ACCATCCAGG AATTGGCCCA AAGCCTGAAC
CTGCCGTTCC GTGACGTGTT CCACCACCTG ACCTTTTTTG AGCGCCTCGG CGTAGTGCGT
AAGCAAAACG ACCTGTACAT CCTGAACCCG GATGGCGTGG ACTCCCTGGC GCGGCGCCAG
TTCGATGGCC AGCCGCGCGA ATCCTATACG CCCGCGCCGG ACTTAAGCGA ACAGCGCCGC
AAAGTGCTGA AGGCTTATCT CAATGCGGAC GGCTCGCTGA AGCAGATTCC TTCCCAACCA
GGCAAACTGC AAATCATTCT CGATTATGTG GTGGAGGCTT TCACGCCTGG CGCGCTTTAC
ACCGAAAAGG AAGTGAACAC GCTGATGCGC CGTTTCCACA TCGATACGGC TGCGTTGCGC
CGATACCTGG TCGACCGGGG CATGCTGGAG CGTAAAAGTG ACGGTTCGCA ATACTGGCGG
ACCGAACCGG AGGCAGAATG A
 
Protein sequence
MQHEMLNFVK ALFHVDRLRM IGALTTQQGA TIQELAQSLN LPFRDVFHHL TFFERLGVVR 
KQNDLYILNP DGVDSLARRQ FDGQPRESYT PAPDLSEQRR KVLKAYLNAD GSLKQIPSQP
GKLQIILDYV VEAFTPGALY TEKEVNTLMR RFHIDTAALR RYLVDRGMLE RKSDGSQYWR
TEPEAE