| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0422 |
|---|
| Symbol | |
|---|
| ID | 5207358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 540636 |
|---|
| End bp | 541523 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640594048 |
|---|
| Product | YdjC family protein |
|---|
| Protein accession | YP_001274803 |
|---|
| Protein GI | 148654598 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3394] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.213578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0884188 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCAA TCCTGGCACA TCTCGGTTTC CGCCCCGATG ATCGGGTCGT CATCATCCAT
GCCGACGATC TCGGCATGTG CCACGCGACC ATTCCCGCCG TTGCAGAACT TTTCGACGCG
GGGCTGGTCT CGTCGGCGGC GACGATGGTT CCCTGCCCCT GGTTTCCGGC AGTCGCCGCA
TATGCCCGCG CCAACCCCGC CGTTGATATT GGCGTCCACG CCACGCTCAC CTGCGAATGG
GAAGCCTGTC GCTGGGGTCC GCTCAGTACA CGCGAACCGG CATCGGGGTT GCTGGACGAT
GAGGGGTACT TCCACCGCAC GACCGCTATG GTTCAGGAGC GCGCCGATCC GGCTGCGGTT
GCTGCGGAAC TGAACGCTCA GATCGACAGG GCGCTCGCAA GCGGTATCGA TGTGACCCAT
ATTGATTCGC ATATGGGATC GGTGTTTGCC CCTCATATGC TGCCGGTGTA CCTTGCTGCC
GCTGCGCGCG TGCATGTGCC GCCGCTTGTG CCACGCCTGA GCGAGGAACG CATGCGTGAA
CAGGGCATGC CGGACGAGAT GATTGCCTTT GCGCGTGAGA GCGCACAACA CCTGGAGGCG
CAGGGGGTGG TGATGGTCGA TGATCTGATC GGCATGCCGC TCGACCGGTA TGAAGAACGG
ATCGAGACGG CAAAACAGGT GCTTGGCACA TTGAAACCGG GGCTGACGTA CCTGATCATC
CATCCGGCGA TTGACACGCC GGAACTACGC GCCATTGCCA GCGACTGGCG CGCCCGCGTC
GCCGATTACC AGGCGTTTTG CAGCGCCGAA CTGCGCGCCT GGGTTCGTGA GCAGGGCATT
CAGGTCGTCG GCTGGCGCCC GATACGCGAC GCGATGCGCA GTCGGTAA
|
|---|
| Protein sequence | MNPILAHLGF RPDDRVVIIH ADDLGMCHAT IPAVAELFDA GLVSSAATMV PCPWFPAVAA
YARANPAVDI GVHATLTCEW EACRWGPLST REPASGLLDD EGYFHRTTAM VQERADPAAV
AAELNAQIDR ALASGIDVTH IDSHMGSVFA PHMLPVYLAA AARVHVPPLV PRLSEERMRE
QGMPDEMIAF ARESAQHLEA QGVVMVDDLI GMPLDRYEER IETAKQVLGT LKPGLTYLII
HPAIDTPELR AIASDWRARV ADYQAFCSAE LRAWVREQGI QVVGWRPIRD AMRSR
|
|---|
| |