| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0413 |
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| Symbol | |
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| ID | 5207349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 527559 |
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| End bp | 529520 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640594039 |
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| Product | ABC-type dipeptide transport system periplasmic component-like protein |
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| Protein accession | YP_001274794 |
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| Protein GI | 148654589 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.457116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTC TCGACAGGAA GATCGCGCTG ACCCTGTTGC TCGCGCTGGT TGCGCCGATC
CTGGCAGCCT GCGGCGGCGG GACGGCACAG CAACCGATCC GCGAAACGGT GGTCGTAACG
GCAGAGCCGG TTCGGGAGAC GGTCGTTGTG CGCGAGACGG TTGTGGCTGA GGCGCCGACG
GCTGCTCCAT CAGGGGCGTT CACCACACCG CACCCGATCC TCAGCGATGT GCGGGTGCGC
CAGGCGATTG CGTACTGCAC CAACCGCCCC GAGTTGATCC AGTCGGTCTA CAGTTACCTG
ACGCCGGAGC AGCAGCAAGA GTTGCTGATG GATACCAACC TGCCGAAGAC GCACTGGGCG
GCAGCCAGCG AAGCGGACGG GATCGTGGTC TATCCGTTCG ACCCTGATAA GGGCAAGGCG
CTGCTCGAAG AGGCGGGCTG GAAACTGCCT GAAGGTCAGC GTGTGCGCGC GAAGGATGGC
GAGCCGCTGT CGCTCGAGTT CACCACCACC AATGCGCAGT TCCGCATCAC CTGGGCAACC
GTGCTGGAGA AGCAGTTGCT CGATAATTGC GGCATCCAGA TCATCCGCAA GCATGCCCCG
GCATCCTGGT GGTTCGGTGG CGCGTCCGGT CTGCGCCGGC GCGACTTTGA ACTTGGCGCA
TTCGCCTGGG TTGGTGAAGC CGATCCCGGT GGTCGCACCC TGTATGCCTG TGACCAGATT
CCGCTGCCGG ATAACAACTG GAATGGGCAG AACTATATGG GCTGGTGCAA CGAGACGGCC
AGCAAGGCGA TCACTGCGGC GAACAATACG CTGAACCGCG AGGAGCGCAT CAAGAACTAC
AAGGCGTTCC AGGTCGAGTT CACCAAGGAC ATGGTCAGCC TGCCGCTGTT CCAGCGCCTC
GAGGCGTATG CCTGGAACAA GGCGTTGAGG GGTCTCAAGC CCGACCCGAC CGAGTATATC
ACCGCGAATG CGTATCAGTG GGAGCGCGCC GATGGCGGCG ACACCATTAT CCTGGGCTTC
ACTCAGGAGC CAGCTTCGAT GTTCACGCTG GTCGAGAGCG CGGCAGTGCA GCGCCAGGCG
GCGCAACTCG TCGAAGGCGT GCTGACCACC CAGTATAGCT ACGACTTCCA GCCGGTGCTG
CAGGATGGTC TTGCGACGAT TGAGTCCGGC AAGGCAAAGA ATGAGGTCGT CGAAGTCAAA
GAAGGTGATA AGGTCTGGGA CGCGACGGGC GCTGCCGTTG AACTCAAGCC GGGCGTTGAG
ATCATCAACT CCGACGGTGA GACGGTCAAG TACGAGAGTG GCACGGTGAA GATGAACCAG
CTCACCGTCA CCTACGATCT CATCAAAGGC ATTAAGTGGT CGGACGGCGA ACCGCTGAAG
AAGGCCGACC TGGAACTGGG CGTCAAGATC GCGTGCGATC CCGACTCAGG GGCGGTCAGC
CTGACCTTCT GCGAGTCGCA CGATAATCTC AACGGTGTCA CCTTTAACAG CGATACCAGC
TACACCATCA AGTTCCTGCC GGGCGTGCAG TGGCCAATTT ACTTCACTGC TCCCTACGGC
GGCTACCCCT CGCATGTGAC CGTTTCGGAC GGGCGGAAAC TGGCGGATGT GCCGGCGAAA
GAGTGGGCAA CTCTGCCGGA AGTCGCCGAA ATTCCGCTGG GGTATGGTCC ATACATCCTG
AAGGAGTGGA AGAAGGGCGA GTTCATGAAG TTCGAGGCAA ACCCGAACTT CGTGCTCGGC
GCGCCGAAGG TCAAGAATGT CATCATCCAG TTCTACGCCG ACACCAATGC GGCAGTAGCA
GCGCTGCTGA CCGGCGAGGT CGACATTCTT GAGAAGGCGA CGCTCGGCGC CGGTCCGGAG
GTGGAAACGG TGCTCAAGGC GGCGGCAGAG GGCAAGATCG AAGCCAAGAC CGACGCCAGC
CCGACCTGGG AGCACATGGA TATGAACCTG TTCATCCGGT AA
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| Protein sequence | MKILDRKIAL TLLLALVAPI LAACGGGTAQ QPIRETVVVT AEPVRETVVV RETVVAEAPT
AAPSGAFTTP HPILSDVRVR QAIAYCTNRP ELIQSVYSYL TPEQQQELLM DTNLPKTHWA
AASEADGIVV YPFDPDKGKA LLEEAGWKLP EGQRVRAKDG EPLSLEFTTT NAQFRITWAT
VLEKQLLDNC GIQIIRKHAP ASWWFGGASG LRRRDFELGA FAWVGEADPG GRTLYACDQI
PLPDNNWNGQ NYMGWCNETA SKAITAANNT LNREERIKNY KAFQVEFTKD MVSLPLFQRL
EAYAWNKALR GLKPDPTEYI TANAYQWERA DGGDTIILGF TQEPASMFTL VESAAVQRQA
AQLVEGVLTT QYSYDFQPVL QDGLATIESG KAKNEVVEVK EGDKVWDATG AAVELKPGVE
IINSDGETVK YESGTVKMNQ LTVTYDLIKG IKWSDGEPLK KADLELGVKI ACDPDSGAVS
LTFCESHDNL NGVTFNSDTS YTIKFLPGVQ WPIYFTAPYG GYPSHVTVSD GRKLADVPAK
EWATLPEVAE IPLGYGPYIL KEWKKGEFMK FEANPNFVLG APKVKNVIIQ FYADTNAAVA
ALLTGEVDIL EKATLGAGPE VETVLKAAAE GKIEAKTDAS PTWEHMDMNL FIR
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