| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0298 |
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| Symbol | |
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| ID | 5207233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 379705 |
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| End bp | 383091 |
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| Gene Length | 3387 bp |
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| Protein Length | 1128 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640593924 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_001274680 |
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| Protein GI | 148654475 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.189592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0770021 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAACA TCTACGACAA TATCGAGTCG CAGTTCGTTG AAGAACTGCG CCGTCTCCTT
CCAGAAGCAG TCGCGTGCTC GTTCTGCGTT GGTTACCTGA ACCTGCGCGG CTGGGATCAG
GTCGCCGATG CTATCGAGCA TCTGAGCGGA GCGGATGAAC GTCACGCCTG TCGCGTCCTG
GTGGGCATGC ATCGCCCGCC TGAAGAGGAG ATGAAGAGTC TGCAACGTGT CCATCGCAGC
CAGGCGGGCA TTGACGGTCC AACCGCAGCG CTCCTTAAGC GCCGTATCAC CGAGAGCTTC
AAAGAGCAGC TTGAATGCGG CGCGCCTTCC AATCAGGCGG AACGCACGTT GCAACGGTTG
GCCCGGCAAC TGCGGGAACG AAAAGTCGTT ATCAAAGCAT TCCTGCGCTA TCCGCTGCAC
GCGAAGCTGT ATCTGATCGA GCGCAACGAC ACCAAAACGC CGCTGATCGG CTTTGTGGGG
AGCAGCAATC TCACCCTGGC GGGTCTTTCC CGACAGGGCG AACTGAACGT GGACGTCGTC
GAGCAGGATG CCGCGCGCAA ACTTCAGCGC TGGTTTGATG AGCGCTGGAA TGATCCGTGG
GCTGTTGATC TGACCGAAGA ACTGGCGCAA CGTATCGAGA ACAGTTGGGC GCGCACAGAA
CTCGTTCGCC CTTACCTGAT GTACCTCAAG ATCGCCTATC ACCTCTCGGA GGATGCGCGC
CAGGGCGAAC GCGAGTTCAA GATGCCATCG ATGTTTCGTG ATGTGCTGCT TGATTTTCAA
AAAGCCGCCG TGTCGCTTGC GGCGCGCAAA CTCCATCGTC ACGGCGGTGT GCTGCTCGGC
GATGTCGTGG GCCTGGGGAA AACACTGATG GCGACGGCTA TTGCCCGTCT CATGCAGGAA
GATAGCGGCG ACAATACGCT GGTCATTTGC CCGCCGAAAC TCGCGCCCAT GTGGGAGCGC
TCCCTGCAAG CGTATCAGAT CGTCGGGCGG GTGCTTTCGC TCGGGCGCGT CATTGAAGAA
CTGCGGGACC TTCCGCGCTA CCGACTGGTC ATTGTTGACG AAAGCCACAA CCTGCGCAAC
CGCGAAGGGA AACGCTATCG CGCCATCCGT GAGTACATCG AGCGCAATGA ATCCCGTGTG
CTGCTGCTCA CGGCGACGCC CTACAACAAG CACTACACCG ACATCAGCAA TCAGTTGCGC
CTGTTTCTCG ATGAAGACCG GGACCTGCAT GTGCGACCGG AACGCTACTT CCGCTGGCTG
GCACAGACGC GGGGTGAGAC GGAGGCCGAT TTTATCGCCC GTTTCCAGAC CTCGCCGCAT
AGCCTGCGCG CGTTTGAGCA AAGTCTCTTC CCTGAAGACT GGCAAGACCT CATGCGCCTG
TTTCTGGTCA GACGCACGCG CCAGTTCATT ATCAGGCACT ACGCCCGATT CGACGAGAAG
AAAGGGCGCT ATTACGTCTG GCGCAACGGT CAACCTCACT ATTTCCCGTT GCGCCAACCC
AAACGGGTTG ACTTCACCAT CGACGAATCA GACCCGAACG ACCAGTACGC CCGGCTCTTT
CGCGATGAGG TGGTGAAAGT TATCGAAAAC TTAGCGCTGC CGCGCTACGG GCTGGCAAAC
TATCTCAAGC CCAATGCTGA GAAAGGCGCT TCTGACGAAG AAAAACGCAT CCTCAACAAT
CTCAACCGCG CCGGCAGACG GCTGATCGGT TTTTGCCGCA CGAACCTCTT CAAGCGCCTC
GAATCGAGCG GCCAAAGCTT TTTGCTCTCT GTGCAGCGCC ATATTGTGCG CAACCTCACC
ACGCTCTACG CGCTTGAAAA CGGCCTGCCC GTCCCCATCG GCGCGCAGGA TGCCGCCATG
CTCGATCCAA CCGTCAGCGA TGCTGATGAA ACGTTGACCG ACATTCCTGA TGCCGGCGAG
TCTGCTGAAG ACGCAGGAAT GATCGGCGCA CGGGTGCGCG GATTGGATGC CTGCCATGCG
CGCGCTGCGA CACTCTACGC GCTGTACCGC AGTGAGTACC GCGATCGGTT CGATTGGTTA
GACCCCAGGT TTTTCCGGCC CGACCTGGCA ACCTGGCTCC GCGCCGATGC TGCGGCGCTC
GCTGGCATCC TGGAGCGGGC AGGCGATTGG AATCCCGGCG CAGATGCCAA ACTGCACGCG
CTCGCCAGCC TGGTGACGAA CGACCACCCC AATGAAAAGA TCCTCATTTT CACCCAATTT
GCCGATACTG CCCTGTATCT TTACGAGCAG CTTCGCGCCA GAGGCATCGA AGACGTCGCC
GTGCTGACCA ATCAGGAAGG TGACCCGGTA ACCCTCACCC GTCGCTTCAG TCCATCTACG
AACGGTGGAC TGGCTGAAGG TGAGACTGAG TTGCGGGTGC TCATCGCCAC CGATGTGCTG
GCTGAAGGTC AGAACCTGCA AGATGCCCAC ATTCTGGTCA ACTACGACCT GCCCTGGGCG
ATTGTGCGCC TCATCCAGCG CGCCGGGCGC GTTGATCGCA TCGGCCAACA GCACGATACG
ATTCGCATCT ACTCGTTCTG GCCCGCCGAA GGGGTTGAGA AGATCATCCG CCTGCGTGAA
CGGCTTGTCT CCCGCCTTCA GCAGAATCAG GAAGTCATCG GCGCCGACGA GTCCTTTTTC
GGTGAGGAAG CCGCTCAGCG CCTGCGCGAC CTGTATACGG AAAAAGCCGG CACGCTTGAC
GACGAAGGCG CCGACGAAGA TATCGACCTG GCAAGCCTGG CTTTGCAGGT ATGGAACAGC
GCCGCTGCAG ATGACCAGAA GGCGTCCCGT GCTCTGCCGC CGATTGTCTC GGCTACCCGC
GCGCTGACGT CAGGTACGGC AGGACCTCCC GGCGTCGTCG CCTATCTGCG CTACCCCAAC
GGCGCCGACG CTCTCATCCG CGTGGACGAA CAGGGCAACC TGGTTTCCCA GTCGCTCTCA
GCGATCTTCC GCGATATTGC CTGCCCGCCG GAAACGCCTG CGCTTGAGCG TACAAAATAC
CATCACGACC TGGTGGCGCG CTGCGTCGAG ATTGCGACGG AAGAGCAGGT CACAGGCGGT
CACCTCGGCA GCCTGCGCAG CGTGCGGCGT AAACTGTGGG AGCGGTTGAA CACCTACCGC
GCTTCCCTGA CCACTGTCTC GCCCGACCGG CTTCAGCAGC TCGATATGGT CCTCGATCTG
ATCTGGCGGT ATCCGCTCAA GAGCGCTGCC CAGGAGTCCA TCAACCGACA AATGCGACTG
GGTATTTCCG ATCCTGATCT CCTCGACATG CTTGCCCGAC GCGCCGGGGA GGGCGTCCTC
TGTGAAATCC AGGATCAAGA AGCGGACGAA TCCGCCGAGC CGCACATCAT CTGCTCGTTG
GGATTGGTTG CAGCAGGAGC GAAGTGA
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| Protein sequence | MPNIYDNIES QFVEELRRLL PEAVACSFCV GYLNLRGWDQ VADAIEHLSG ADERHACRVL
VGMHRPPEEE MKSLQRVHRS QAGIDGPTAA LLKRRITESF KEQLECGAPS NQAERTLQRL
ARQLRERKVV IKAFLRYPLH AKLYLIERND TKTPLIGFVG SSNLTLAGLS RQGELNVDVV
EQDAARKLQR WFDERWNDPW AVDLTEELAQ RIENSWARTE LVRPYLMYLK IAYHLSEDAR
QGEREFKMPS MFRDVLLDFQ KAAVSLAARK LHRHGGVLLG DVVGLGKTLM ATAIARLMQE
DSGDNTLVIC PPKLAPMWER SLQAYQIVGR VLSLGRVIEE LRDLPRYRLV IVDESHNLRN
REGKRYRAIR EYIERNESRV LLLTATPYNK HYTDISNQLR LFLDEDRDLH VRPERYFRWL
AQTRGETEAD FIARFQTSPH SLRAFEQSLF PEDWQDLMRL FLVRRTRQFI IRHYARFDEK
KGRYYVWRNG QPHYFPLRQP KRVDFTIDES DPNDQYARLF RDEVVKVIEN LALPRYGLAN
YLKPNAEKGA SDEEKRILNN LNRAGRRLIG FCRTNLFKRL ESSGQSFLLS VQRHIVRNLT
TLYALENGLP VPIGAQDAAM LDPTVSDADE TLTDIPDAGE SAEDAGMIGA RVRGLDACHA
RAATLYALYR SEYRDRFDWL DPRFFRPDLA TWLRADAAAL AGILERAGDW NPGADAKLHA
LASLVTNDHP NEKILIFTQF ADTALYLYEQ LRARGIEDVA VLTNQEGDPV TLTRRFSPST
NGGLAEGETE LRVLIATDVL AEGQNLQDAH ILVNYDLPWA IVRLIQRAGR VDRIGQQHDT
IRIYSFWPAE GVEKIIRLRE RLVSRLQQNQ EVIGADESFF GEEAAQRLRD LYTEKAGTLD
DEGADEDIDL ASLALQVWNS AAADDQKASR ALPPIVSATR ALTSGTAGPP GVVAYLRYPN
GADALIRVDE QGNLVSQSLS AIFRDIACPP ETPALERTKY HHDLVARCVE IATEEQVTGG
HLGSLRSVRR KLWERLNTYR ASLTTVSPDR LQQLDMVLDL IWRYPLKSAA QESINRQMRL
GISDPDLLDM LARRAGEGVL CEIQDQEADE SAEPHIICSL GLVAAGAK
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