Gene RoseRS_0266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0266 
Symbol 
ID5207201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand+ 
Start bp336650 
End bp337273 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content58% 
IMG OID640593895 
ProductTetR family transcriptional regulator 
Protein accessionYP_001274651 
Protein GI148654446 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.437766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.000931508 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAGACA TTAACAACGA ACCGACGTAT GGTCCTACTG CGGCCCGCAT CCTGATGACG 
GCGACGCGGC TTTTCATGCA GCGCGGCTAC AGCGCCGTGT CGATCAACGA TATTGTGCAG 
GCTGCCGATG TAACCAAGCC GACGCTGTAC TATCACTTTT CCGACAAGGA AGAGTTGTTC 
GTCCTGGTCG CCATTCACAT GCTGGCGGAT ATGCACGGGA CTATGCGGCG TGTCATTGCT 
GAACAATCAG ATACACGCGG GCGCCTGATT GCACTGGCGA AGGTATTGCT GAACGAACCG 
AACGGCGACA CGCGTATGAT GCGTCATCAG GCGCGTGAAC ATCTCAGCCC GGAACGTCAG 
CGGCGCCTGG CGGATGCATT CAGGCGGTAC ATGGTCGAAC CGCTGCGCCA GGTGATGCAG 
CAGGGTCTCG ACAATGGCGA ACTGACAAGG CACAGCGCCT ATGATCTGGC AATGCTGTTC 
CTTGGTTTGA TGGAGGGGTT CCAGCGCCAG ATGGCGCCGC CGGTCGCTCC TGAGCACGGC 
GAGATGTATC AGGCGATCTC AACCGACCGT TTTTCTGCCG AAACGCTGGT CGATCTGTTC 
CTCTACGGCA CGGCGGTGCG TTAG
 
Protein sequence
MQDINNEPTY GPTAARILMT ATRLFMQRGY SAVSINDIVQ AADVTKPTLY YHFSDKEELF 
VLVAIHMLAD MHGTMRRVIA EQSDTRGRLI ALAKVLLNEP NGDTRMMRHQ AREHLSPERQ 
RRLADAFRRY MVEPLRQVMQ QGLDNGELTR HSAYDLAMLF LGLMEGFQRQ MAPPVAPEHG 
EMYQAISTDR FSAETLVDLF LYGTAVR