| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0178 |
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| Symbol | |
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| ID | 5207113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 223683 |
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| End bp | 226601 |
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| Gene Length | 2919 bp |
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| Protein Length | 972 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640593808 |
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| Product | hypothetical protein |
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| Protein accession | YP_001274564 |
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| Protein GI | 148654359 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.329993 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGA CATCCACCCC TGGTTCGTCA CAACCTGCTG CGCCCGGTCT CTCACTGAAA
CGCTGGGGCA GGTGGTGGTC GCCCGGATCG CTGGTCGGCG TGCTGCGCGT CGTCAGCCGA
CGGCTGTGGA GCCACCTGGG TCTGATGCTT GCCATTGCCG TCGGGTTCAT CGTCGCCATC
GGGTTGACTG TCAGCATCCC GGTGTATGCC GAGGCGGTCG GCTACCGTAT CCTGCGCGAC
GAGCTGGCGC AGGGGGAAGC CGGTTCGAAG CGACCGCCGT TCGCCTTCAT GTTTCGCTAC
CTCGGCTCGC AGAGCGGGGT CATTTCCTGG CGCGACTATG CCCCGCTCGA TGAGTATATG
CGCACCCAAC TGGCGGAACG CCTTGATCTG CCGATCACCA CGGCGGTGCG CTATGTTGCG
ACGGACAAAG CGCCCCTCAT GCCATCCAGC GGCGTCGGGA AGCCGCTGAT CTTCGTCAAT
ACCGCCTTCG CCACCGACTT CGAGCAGCAC ATCGAGATTA TCGATGGGAC GTTTCCCCAA
CCGGCATCCG CCGATGGTCC GATCGAGGTG CTGATCTCGG AAGACCTGTC GGCACGCCTC
GGTTTTCAGG TTGGCGAGGA GTACCTCATT CTCGGTCCGC AGGAACAGCG CGTCGAGCAG
AGTTATCCCA TCCGGATCGC CGGGGTGTGG CGGGTGCGCG ATCCCGGCAG CGACTACTGG
TTCTACGATC CAACGACCCT GTACGATACG CTGTTCGTGC CGGAGGAGAG TTTCCGCGAA
CGCCTGACGG CGATCAACCC GAAACCGGTC TATGTCGCTA CATGGTACGC GATTGCGGAT
GGGAGCAGCG TGCGCTCTTC GGACGTTGCG GATGTGCGGG CGCGCATCAA CCGGATCGCC
ACCGACATCA CCACCATTCT GCCCGGTTCG CGCATCGACA TTTCGCCGGC GCAGGCGCTG
GCGGAACATC AGCGTCAGGT GCAGCGACTG ACCCTGATCC TGACGATTTT CAGCATTCCG
GTGCTTGGTC TGATTGCATA CTTCATCCTG CTGGTCGCCG GGTTGGTGGT GCAGCGCCAG
AGCAACGAGA TCGCCGTGTT GCGCAGCCGT GGCGCTTCGC GCATTCAGGT GCTTGGCATC
TATCTGCTCG AAGGCCTGCT GCTTGGCGCT GTTGCGCTGG CGCTCGGCGT CGCTCTGGGG
CAGGGCGCCG GTTTGCTGAT GACCTGGACG CGCTCGTTCC TGGATGTGCA GCCAGGGGAA
CTGCTGCCGA TCGAGTTGAC GCCAGACGCC TGGCAGCGCG CCTGGCAGAT GCTGGCGCTG
ATGGTGATCG CAAGCCTGTT GCCCGCGTTC GGTGTCGCGC GGTATACGAT TGTGTCGTTC
AAGAGCGAAC GCGCGCGTGC GACGCGCAAG CCGTTCTGGC AGCGCATGTA CCTCGATCTC
CTGCTTCTGA TACCGGTCTA CTACGGGTAT ACGCTTTTGC AGCAGCGCGG CACAGTGTCG
TTCCTCGGCA CAGACGATCC GTTCGCCAAT CCGCTGCTCC TGCTGGCGCC CACGCTCTAT
ATTTTCACCC TGGCGCTGGT CGCCACGCGC ATCTTCCCGC TGACGATGAG CGTGCTGGAG
CGGGTGGCGC AGTTCATGAG CGGCGTGGCG ACGGTGACGG CGCTACGGTA CCTGGCGCGC
ACACCGGGCG CCTACACCGG TCCGGTCCTG TTGCTGACCC TGACGCTCAG CCTGGCGACA
TTCACCGCGT CGATGGCGCA AACGCTCGAC CGTCACCTGA TCGATCAGGT GTACTACGAG
AACGGCAGCG ATGTGCGGTT CTACGACCTG GGGCAGGGCG GCGGACTTTC CGGTCCGATG
GCGGGGATGC AGCCGCAACA ACCGGGTCCA TCCGATGCAA TGAACGAAGC GCGCTTCATG
TTTCTGCCGG TCACCGATTA CCTCACCATC CCTGGCGTCG CAGCGGCAAC GCGCGTCTCA
ATCAGTCAGG TCGAGATCAG CCTTGCCAAT CGCACGATCC CTGCCCGGTT CATCGGCGTT
GATCGCGTGG ATCTGCCCGG CGTCATCCAC TGGCGCGACG ACTATGCTGG CGAGTCGCTC
GGTGCGTTGA TGAATCGCCT GGCGGACGAC CCTGCGGCTG TGCTGGTCAA CAGCGCCTTT
GCAGCCCAGA ATCGTCTGCG ACCCGGCGAC CGCTTCGAAG TGATCATGAA CGATCTCGAC
AGAAAGGTGC GTGTGCCGGT CATTGTCGCC GGCTACGTGA ACCTGTTCCC GACCGTCTAT
CCCGGCGATG GTCCGTTCCT GATCGGCAAT CTCGACTATG CGTTCGACAT GCAGGGCGGG
CAGTACCCCT ACGATGTCTG GCTTCGTCTG ACGCCCGGCG CTGATCGCAA TGCAATCGAT
GAAGGCATTT GCGAACTGGG ATTGCGCACC TTCGAGCGCG GGTTTGCACC GGCGACAATC
ATTACCGAGC ACGCGCGTCC AGAGCGCCAG GGATTCTATG GATTGCTCTC GGTCGGGTTC
ATCGCCTCGG CATTTTTGAC GGTGCTCGGC TTTCTGTTCT ACTCGGCGCT CTCATTTCAG
CGACGGTTCG TCGAACTGGG CATGCTGCGC GCCATCGGTC TTTCGACCAG ACAACTCGGC
GCACTGCTGG CATGGGAGCA GGCGTTGATC ATCGGCGTGG GGATGATCGG CGGCACCCTG
ATCGGCGTCA CCGCCAGCCA GTTGTTCATT CCGTTCCTGC AAGTCCGACG CGGCGCCAAT
TCACAGATTC CGCCGTTTGT CGTACAGATC GCCTGGGAAC AGATCACGAT CATCTATATC
ATCTTCGGTG CGATGCTGCT GGCGGCAGTC CTGATCACCA TCGCGCTGCT CCGGCAGATG
AAACTGTTCC AGGCAGTGAA ACTGGGTGAA GCGATATAA
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| Protein sequence | MATTSTPGSS QPAAPGLSLK RWGRWWSPGS LVGVLRVVSR RLWSHLGLML AIAVGFIVAI
GLTVSIPVYA EAVGYRILRD ELAQGEAGSK RPPFAFMFRY LGSQSGVISW RDYAPLDEYM
RTQLAERLDL PITTAVRYVA TDKAPLMPSS GVGKPLIFVN TAFATDFEQH IEIIDGTFPQ
PASADGPIEV LISEDLSARL GFQVGEEYLI LGPQEQRVEQ SYPIRIAGVW RVRDPGSDYW
FYDPTTLYDT LFVPEESFRE RLTAINPKPV YVATWYAIAD GSSVRSSDVA DVRARINRIA
TDITTILPGS RIDISPAQAL AEHQRQVQRL TLILTIFSIP VLGLIAYFIL LVAGLVVQRQ
SNEIAVLRSR GASRIQVLGI YLLEGLLLGA VALALGVALG QGAGLLMTWT RSFLDVQPGE
LLPIELTPDA WQRAWQMLAL MVIASLLPAF GVARYTIVSF KSERARATRK PFWQRMYLDL
LLLIPVYYGY TLLQQRGTVS FLGTDDPFAN PLLLLAPTLY IFTLALVATR IFPLTMSVLE
RVAQFMSGVA TVTALRYLAR TPGAYTGPVL LLTLTLSLAT FTASMAQTLD RHLIDQVYYE
NGSDVRFYDL GQGGGLSGPM AGMQPQQPGP SDAMNEARFM FLPVTDYLTI PGVAAATRVS
ISQVEISLAN RTIPARFIGV DRVDLPGVIH WRDDYAGESL GALMNRLADD PAAVLVNSAF
AAQNRLRPGD RFEVIMNDLD RKVRVPVIVA GYVNLFPTVY PGDGPFLIGN LDYAFDMQGG
QYPYDVWLRL TPGADRNAID EGICELGLRT FERGFAPATI ITEHARPERQ GFYGLLSVGF
IASAFLTVLG FLFYSALSFQ RRFVELGMLR AIGLSTRQLG ALLAWEQALI IGVGMIGGTL
IGVTASQLFI PFLQVRRGAN SQIPPFVVQI AWEQITIIYI IFGAMLLAAV LITIALLRQM
KLFQAVKLGE AI
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