Gene RoseRS_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0106 
Symbol 
ID5207039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp125269 
End bp125991 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content60% 
IMG OID640593737 
Producthypothetical protein 
Protein accessionYP_001274496 
Protein GI148654291 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.39004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCG GCAAGGCGTT CAGCTTCGTG ACCGAAGACG AACAGTGGAT CACCAAGGTG 
CTGATCGGCG GTCTGATTCA ATTCGTGCCG TTGTTGGGAA CAATCGCTAT TTTGGGGTAC
TCCTACCGTG TGGCGCTGAA TGTGGCGCGC GGCAATCCGC GTCCGCTGCC AGCGTGGGGC
GAGTTTGGCG ACTTCCTGGG ACGAGGTTTC ATGGCGCTGG TCATCCAGAT CGTGTACCTG
CTGCCACTCA TCGTGCTCTA TGGTGTTTTT GCGTTCCTGA CAGGTGCAGC GGCAGTGGCA
GCAGGAGACT CGGATGCAGG TGCTGGGGTT ATCGGTTTGC TCGGTTTGTG GTGCCTCATT
CCGCTCCAAT CGGTCGTAGC GCTGGTGTGC GGCTTTGCAG CGCTGGCGGC GATTATGCGC
TACCTGGCGA CTGACTCGCT CGGTGAGGCG TTCAAGTTTG GCGAGGTGAT CGCAACTCTG
CGCAATCATA TCGGGTCGTT TCTGATGATT CTGGCTGTAG GCATCCTGGC AGGTCTGGCT
GCCGGTCTGG GTGTGATCGC CTGCGGTATC GGCGTTCTCT TTACCGGGTT TTATGCGCAG
TGCGTGATCG GACACGTGAT CGGTCAGGCG ATGCAGCGCA TCTTCCCGCC GCAGCAACCG
GTCTATGCCG CGCCCGGCTA CTACGGTCCG CCGCCGGGAT ACGGACCTCC GCCGTCATAC
TGA
 
Protein sequence
MEIGKAFSFV TEDEQWITKV LIGGLIQFVP LLGTIAILGY SYRVALNVAR GNPRPLPAWG 
EFGDFLGRGF MALVIQIVYL LPLIVLYGVF AFLTGAAAVA AGDSDAGAGV IGLLGLWCLI
PLQSVVALVC GFAALAAIMR YLATDSLGEA FKFGEVIATL RNHIGSFLMI LAVGILAGLA
AGLGVIACGI GVLFTGFYAQ CVIGHVIGQA MQRIFPPQQP VYAAPGYYGP PPGYGPPPSY