Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0040 |
Symbol | |
ID | 5206973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 43467 |
End bp | 45119 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640593674 |
Product | ABC transporter related |
Protein accession | YP_001274433 |
Protein GI | 148654228 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCTTGA ACATTGCCCT GTTTGCGATG GTGGGTTGGG CAATAGAGGG GCTAAGGGTC GGTGCGTCCA TTTTCTCCAT TGGCACGCTG ATCGGCGCCT TGACCCTGAT CGCAGGCAAG GGCTTCTCCG GATGGCTTGA GCGCTTTGCC GCAGCGCAGG CGGCAGCCGA CACGAAAATC GCAGTTCGCG ATACGATCTA TGCCCATGCC CTGCAAATCG GACCGGTCGG GCTGGATCGT GAGCGCACGG GCGAATTGGT CAATACCTCC GTCGATGGCA TGGACTGGCT GGAGCAGTAC TATAGCATCT ACCTGGCGCA GTTCTTTGTT GGCATGATCA GCCCTGTGCT GGTCATCGCC TACCTTGCCA CGCAGGATAT CGTGACAGCG CTGATTCTGC TGCTGGCATT GCCGCTGCCG CCGCTCCTGC TGGGAGCGAC TTCCCAACGG TTCAAAGCAG TCAGCGATCG CTTTTTTGCG ACTGCGAACC ATTTGAGTGC CCAGTTCCTC GACAGCCTGC AAGGATTGAC GACCCTCAAG ATGTTCAATC AGGGAAAAGC TCGCGGCGAG CAGTTTCGTC AGGAAAATGA GACGCTACGC CGGGAAACGA TGCGCCTGCT GGCGGTTAAT CAGATCATGC TGTTTGTCGT GGACGGTGGA TTCGCCCTGG CGACAACGAC AGCGTTGACG CTCACATCGC TCTGGCGGCT GTCAACAGAC AGCATTACGC TGGGAACAGC CGTTACCTTC GTCCTGCTCA GCTTCGAGCT TGCCCGCCCG CTCAATCTTA TCGGGCAGTT TTTCTTCGCT GGCGCCATCG GTCGCGCAGT GGCGAAAAAG ATTACCGCGT TTCTTGATAC GCCGCCAGGA GTCGCAGAGA CGTCTCCGTC GGCGCATACG ATCACCATCA CCACTGCGCC TGATATTCGA TTGGAGGGTG TGACATTCCA GCATGTGGGA AGAGACGCTC CTGCACTGGA CAATTTCTCG CTGACCATCC GGGCGGGTGA ACGGGTTGCG CTGGTGGGGG CGAGCGGCGC CGGGAAGAGC ACGGTCTTCC ATTTGCTGCT CCGCTTTATC GCAGCACAAA AGGGGACTAT TCTCATTAAT GGCATTCCTA TCTCGGAGTT TTCACCTGAC CAGCTGCGTG CATCGATTTC ACTGGTATCG CAAGACCCCT ACATCTTCTA CGGAACTGTC GAGGAAAATC TGCGGGTGGC AAAGCCCGAC GCAACCGCCG AGGAACTGGA ACGCGCCATG CGCGCCGCAC ACTTTGATGA CGTTGTCGCG CAACTCCCCG CCGGTTTGAG CACCATTATC GGCGAACGCG GCAGCACCCT GAGCGGCGGA CAGGCGCAGC GTCTGGCGCT GGCGCGTGCA TTCCTGAAGG ACGCGCCGAT CGTGCTGCTC GACGAGCCAA CGTCACAACT TGATAGTCAG ACTGAAGCGG TTATTCAGGA TTCTATCGAC CATCTCCTCA AAAATAAGAC GGTGATCATT ATCGCTCACC GTTTGAGCAC GGCCAGTCGC GCCGATCACA TCGTGGTGAT GGAGCACGGA CGAATTGTCG AGTCAGGTTC GCCTGCCGGG CTGCTGCGAC AGAACGGCGT ATTCGCACGT ATGGTTCATC TCGCTTCAGG AGTTATGCGA TGA
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Protein sequence | MVLNIALFAM VGWAIEGLRV GASIFSIGTL IGALTLIAGK GFSGWLERFA AAQAAADTKI AVRDTIYAHA LQIGPVGLDR ERTGELVNTS VDGMDWLEQY YSIYLAQFFV GMISPVLVIA YLATQDIVTA LILLLALPLP PLLLGATSQR FKAVSDRFFA TANHLSAQFL DSLQGLTTLK MFNQGKARGE QFRQENETLR RETMRLLAVN QIMLFVVDGG FALATTTALT LTSLWRLSTD SITLGTAVTF VLLSFELARP LNLIGQFFFA GAIGRAVAKK ITAFLDTPPG VAETSPSAHT ITITTAPDIR LEGVTFQHVG RDAPALDNFS LTIRAGERVA LVGASGAGKS TVFHLLLRFI AAQKGTILIN GIPISEFSPD QLRASISLVS QDPYIFYGTV EENLRVAKPD ATAEELERAM RAAHFDDVVA QLPAGLSTII GERGSTLSGG QAQRLALARA FLKDAPIVLL DEPTSQLDSQ TEAVIQDSID HLLKNKTVII IAHRLSTASR ADHIVVMEHG RIVESGSPAG LLRQNGVFAR MVHLASGVMR
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