Gene RoseRS_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0004 
Symbol 
ID5206937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4002 
End bp4865 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content63% 
IMG OID640593638 
Producthypothetical protein 
Protein accessionYP_001274397 
Protein GI148654192 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.971077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000830744 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGAAT CGACCGCTAC CGAAGTGCAG CAGTTGATCG CCGAAGGACG AGCAGCCGCG 
CTGGCAGGCG ATACGTTTAC GGCGCGCGCC CGGTTTCGCC GCGCCACTGA ACTCGACAGC
GAGAATCCCG AAGCGTGGCT CGGTTTGAGC AGCGTCGTTC CGATCCTTGC CGAAAAGCGC
GACTATCTCC AGCGCGTGCT GGCGCTCGAC CCGACCAATA CCGAAGCCGC AGATAGTCTG
GCGTATGTCG AAAAATTGAT TGCGGAAGGG TTGCAGATTG CACCTTCACA CCGTCGCCAG
GAACAACACG CAAGCGGTAA TGCCTCGCCG TTGCTCTCCG CCCCGGAACC GCCGACCACA
ACTGTCGATG TGGCGTACTG CTACATCCAC CCCGACCGTG AGACCGGTTT GCGCTGCGTG
CAGTGCAACC GCCCGATCTG CGGCTCGTGC GCGCAGATGA CCCCCGTTGG CCAGTTGTGC
CCGGAGTGCC GCAAGGCGCG CCGCCCGCCG CACTACCAGG CGGAACTTTC GCACATGCTG
ATCGGTGTGG TGATTGGGTT TTTTGCTGCG CTGATCGGTT CGATTCTGGT CGTGGCGCTT
GCCGGTGTGC CGTTTTTGGG GTTGTTCCTG GCAATGATGT CCGCTCCGCT CATGGGTGCG
CTGACGGTGC GCATCGTCGA GCAGTTGACG CACAAGCGCG GACGCGCAAT GCAGGCGTCG
GTCGGCGTCG GGTTGGGGTT GGGTGCGCTG CCGCTCTTTG GGTTTGGCGT TATTGCCCTG
CTGAGCGGCG CCGTGTTGCA GTTGCTGTTG ATCGGGTTGT GGATGGCGCT GCTGATCGTT
ACGGCTGTGG CGCGCCTGCG TTAG
 
Protein sequence
MTESTATEVQ QLIAEGRAAA LAGDTFTARA RFRRATELDS ENPEAWLGLS SVVPILAEKR 
DYLQRVLALD PTNTEAADSL AYVEKLIAEG LQIAPSHRRQ EQHASGNASP LLSAPEPPTT
TVDVAYCYIH PDRETGLRCV QCNRPICGSC AQMTPVGQLC PECRKARRPP HYQAELSHML
IGVVIGFFAA LIGSILVVAL AGVPFLGLFL AMMSAPLMGA LTVRIVEQLT HKRGRAMQAS
VGVGLGLGAL PLFGFGVIAL LSGAVLQLLL IGLWMALLIV TAVARLR