Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0004 |
Symbol | |
ID | 5206937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4002 |
End bp | 4865 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640593638 |
Product | hypothetical protein |
Protein accession | YP_001274397 |
Protein GI | 148654192 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.971077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000830744 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGAAT CGACCGCTAC CGAAGTGCAG CAGTTGATCG CCGAAGGACG AGCAGCCGCG CTGGCAGGCG ATACGTTTAC GGCGCGCGCC CGGTTTCGCC GCGCCACTGA ACTCGACAGC GAGAATCCCG AAGCGTGGCT CGGTTTGAGC AGCGTCGTTC CGATCCTTGC CGAAAAGCGC GACTATCTCC AGCGCGTGCT GGCGCTCGAC CCGACCAATA CCGAAGCCGC AGATAGTCTG GCGTATGTCG AAAAATTGAT TGCGGAAGGG TTGCAGATTG CACCTTCACA CCGTCGCCAG GAACAACACG CAAGCGGTAA TGCCTCGCCG TTGCTCTCCG CCCCGGAACC GCCGACCACA ACTGTCGATG TGGCGTACTG CTACATCCAC CCCGACCGTG AGACCGGTTT GCGCTGCGTG CAGTGCAACC GCCCGATCTG CGGCTCGTGC GCGCAGATGA CCCCCGTTGG CCAGTTGTGC CCGGAGTGCC GCAAGGCGCG CCGCCCGCCG CACTACCAGG CGGAACTTTC GCACATGCTG ATCGGTGTGG TGATTGGGTT TTTTGCTGCG CTGATCGGTT CGATTCTGGT CGTGGCGCTT GCCGGTGTGC CGTTTTTGGG GTTGTTCCTG GCAATGATGT CCGCTCCGCT CATGGGTGCG CTGACGGTGC GCATCGTCGA GCAGTTGACG CACAAGCGCG GACGCGCAAT GCAGGCGTCG GTCGGCGTCG GGTTGGGGTT GGGTGCGCTG CCGCTCTTTG GGTTTGGCGT TATTGCCCTG CTGAGCGGCG CCGTGTTGCA GTTGCTGTTG ATCGGGTTGT GGATGGCGCT GCTGATCGTT ACGGCTGTGG CGCGCCTGCG TTAG
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Protein sequence | MTESTATEVQ QLIAEGRAAA LAGDTFTARA RFRRATELDS ENPEAWLGLS SVVPILAEKR DYLQRVLALD PTNTEAADSL AYVEKLIAEG LQIAPSHRRQ EQHASGNASP LLSAPEPPTT TVDVAYCYIH PDRETGLRCV QCNRPICGSC AQMTPVGQLC PECRKARRPP HYQAELSHML IGVVIGFFAA LIGSILVVAL AGVPFLGLFL AMMSAPLMGA LTVRIVEQLT HKRGRAMQAS VGVGLGLGAL PLFGFGVIAL LSGAVLQLLL IGLWMALLIV TAVARLR
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