| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0001 |
|---|
| Symbol | dnaA |
|---|
| ID | 5211616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 415 |
|---|
| End bp | 1860 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640593635 |
|---|
| Product | chromosomal replication initiation protein |
|---|
| Protein accession | YP_001274394 |
|---|
| Protein GI | 148654189 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000056365 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000112062 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | GTGAACCTCA CCAAAGTCTG GAATACAACA CTGGGATCGC TCCAGGTTCA ACTGCCGCGC
CACGAGTACA ACACGTGGGT ACGCGGCGCC ACCCTGCTCG AGATCGACAA TGGCGTGGCG
ATTGTTCGCG CGCCGAACGC CTTCATCAAA GAAGGGTTGG AAAGCCGATA TCTCGCCACT
CTCCGCGAAC AGTTGGGATC GGTGGTCGGC TTTCCGGTCG ATGTGCGCGT CGTCCTGGCA
TCGCCCGACT TCGAGCGCTT CGATGGCGCA CCACACAACG GGCGATCCAC GGAGAACGAG
ACGCGCAGGA CTGCACAAAG TTTACCGTTG CAGCCGGGCA GCTCCAGCAA TGGCGTGAAC
CATCCGCTCG AACGGACGCC GCCACAGCAA CTCGAATTAC ATCGGGCGGT GCGTTCCAGC
ATGCTCAATC CGCGGTATAC CTTCGACCGC TTCATTATCG GACCAAGCAA TCGCCTGGCG
AATGCCGCGT GCATGGCGGT GGCGGAACAT CCGGCGCAGG CGTACAATCC GTTGTTCCTC
TACGGCGGCG TGGGATTGGG GAAAACGCAC CTCCTGCACG CCATCGGCAA CTTCGTGCTG
GACCGCGACC CGGAGGTGAA TGTGCTCTAC GTCTCTTCCG AGACGTTCAC CAATGACCTG
ATCAACTCCA TTCGCCGCCA GCAGACGGAG GAGTTTCGCA TTCGTTACCG CAATATCGAT
ATTTTGCTTA TCGACGATAT TCAGTTCATT GCGGGCAAAG AGCAAACCCA GGAAGAGTTT
TTTCATACCT TCAACACACT GCATTCTGCC GGGAAACAGA TCGTCATATC GTCAGACCGA
TCGCCCAAGG CGATCCTGAC GCTCGAAGAG CGCCTGCGCT CACGCTTTGA GTGGGGGTTG
ATCGTCGATG TGCAAATGCC TGATCTGGAG ACGCGCACAG CAATTCTGCG CGCAAAAGCG
GAGCAATCAC CGGTTCCGGT ACCCCAACCG GTGATCGACT TCCTTGCCCA GCGCATTCAG
AGCCATATTC GCGAACTGGA AGGATGCCTC AATCGGGTGA CAGCATTTGC GCAAATGTAT
AATGTTCCGG TGACCATCGA GGTGGCGACC GCAGCACTGA GCGAACTGCT CGACACCAAC
CGGCGCAAAC GGGTGACCCC CGATGCCATC CTGCGCGAAG TCGCCGCATT CTACAGCGTC
GATCTGCGTG CATTACAGGG GCGCAGTCGT AGTCGCAATA TCGTCATTCC CCGTCAGGTG
GCGATGTATC TTCTCCGTGA GGAAACCGAC TCGAGCCTGA TGGAAATCGG TCAACTGCTC
GGCGGGCGTG ATCACACGAC CGTTATGTAT GGTTGCGAGA AGATCACCGA AGAACTCAAC
TCGGACGCGC GCCTGCGCCA GGAAGTTGCG ACGATTCGCG AACGCCTGCT GCACAGCGCC
GGATAA
|
|---|
| Protein sequence | MNLTKVWNTT LGSLQVQLPR HEYNTWVRGA TLLEIDNGVA IVRAPNAFIK EGLESRYLAT
LREQLGSVVG FPVDVRVVLA SPDFERFDGA PHNGRSTENE TRRTAQSLPL QPGSSSNGVN
HPLERTPPQQ LELHRAVRSS MLNPRYTFDR FIIGPSNRLA NAACMAVAEH PAQAYNPLFL
YGGVGLGKTH LLHAIGNFVL DRDPEVNVLY VSSETFTNDL INSIRRQQTE EFRIRYRNID
ILLIDDIQFI AGKEQTQEEF FHTFNTLHSA GKQIVISSDR SPKAILTLEE RLRSRFEWGL
IVDVQMPDLE TRTAILRAKA EQSPVPVPQP VIDFLAQRIQ SHIRELEGCL NRVTAFAQMY
NVPVTIEVAT AALSELLDTN RRKRVTPDAI LREVAAFYSV DLRALQGRSR SRNIVIPRQV
AMYLLREETD SSLMEIGQLL GGRDHTTVMY GCEKITEELN SDARLRQEVA TIRERLLHSA
G
|
|---|
| |