Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2393 |
Symbol | |
ID | 5204471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009516 |
Strand | + |
Start bp | 2447 |
End bp | 5251 |
Gene Length | 2805 bp |
Protein Length | 934 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640593622 |
Product | Type II restriction enzyme methylase subunits-like protein |
Protein accession | YP_001274371 |
Protein GI | 148641527 |
COG category | [V] Defense mechanisms |
COG ID | [COG1002] Type II restriction enzyme, methylase subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.233566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATAG ATTACAAGCA CGTCAGACAA CAATTACAAC AAATCGTTCA CGACTATAAA GACTCTGAGG GCTATGAGCG TGGCCAAAGC CAAAACTTTT GGACTCAAGT GTTTAATGCT TATGGCGTGT CTGGCCAAAC TCAAACTAAA GCATTTGAAC ATCGTCTTAA AGACAAATCT AATCAAAAAT ACGTTGATGC TTTCATCCCC AAATTGGTCA TAATTGAGCA AAAAAGTCGT GGTGTAGATT TAAATAAAGC CTATACACAG GTGTCTGAGT ATTACGATCG TATTAACGCT AAAGACAAGC CTAGATACAT CATCTTATGC AACTTCGATG AAATTTGGCT GTATGACATC AACAACCCAT TAGATATTAA AAAGCATCAA TGTCCACTCT CTGATCTGCC AAACAACGCT GAATGGTTCG AGTTCTTATC GCCTGAAAGC CAACAATCTA ATGAGATTAT CGAAGAAAAC CCCATCAACC GACAAGCTAC TGAAAAGCTA GCTAAACTGC ACCAGGCTTT CATTGAGGAT GGTGTAGATC CTGATGAATT AGCCTTATTT TTAACACGCC TAATCTTCTG TTTCTTTGCT GACGACACCG CTATTTTTGG TAAAAAACAC GTACTGCACA ATTTGTTAAA AAACCATGCA GCCACCGATG GTAGTAACTT ACAGCAGATA CTAACCACTT TATTTGACAC ATTAAACACT GAGCATCGTT CAAGCAGATT GCCTGAGCAT TATGCTCAAT TCGCCTATAT CAATGGCGGT CTTTTTGAAG AAACTATCAA CATCCCTTAT TTCGATGAAA AGCTATATAA CCTAGTTATG GAGTGTGATG CACTCGATTG GACTGAGATT AGCCCTGCAA TCTTCGGTTC GATGTTCCAG AGTGTATTGG ATGCTAGTGG GGGAGATAGC ACTGAGGATA AACGGCGTGA GTTTGGTGCT CACTACACCA GTGAGAAGAA TATTCTAAAA GTCATCAACT CATTGTTTTT ACAAGAGTTA CGTGATGAGT TTTCTAAGTG TACTAACAAC ACACCAAGAG CCGTACAGCT ATATGAAAAA CTGCCTACAC TAAAGTTCTT TGACCCTGCT TGTGGTTGCG GTAACTTTTT AATCATTGCC TATCGTGAAT TACGTCTATT AGAAAACCAG TTGATTGCCA AGATATTTGG TGATCAAAAG GGATTACTTG ATATTAGCAG TATGTGTAAT GTGACCGTAG ATCAGTTTTA CGGCATTGAG ATTGAACCTC ATGCCGTTCA TATCGCTCGT GTTGCTATGT GGATCACTGA CCACCAGTTA AACATGACCA CTGCGGAGCG TTTTGGCACA ACCAGACCGA CCACACCGAT TGTTTATAGC CCTCATATTA TTGAAGGTAA TGCCTTACAA ATAGATTGGG AAACAGTCTT ACCTGCCAAT GATTGTAGCT ATGTAATGGG AAATCCTCCA TTTATCGGGA AATCCAATCA AAGTTCTGAA CAAAAGTCAG ATATAAAATT AGTAGCTAGC CATATTAAAA ATCACAAGTC TTTAGACTAT GTAGCAGGTT GGTATATAAA ATCCATGCAT TATATGCAAT CAGTTAATAA TGCAAATCAT TATATAGATA CAGCTTTTGT ATCAACAAAC TCGATAGTTC AAGGTGAGCA AGTTGACATC CTATGGAGAT ATCTAATTGA TGATTGCAAA GGCCATATAA ACTTCGCACA TCATACCTTT AAATGGAGCA ATGAGGGCAA AGGGATAGCT GCGGTTCATT GCATTATTGT TGGCTTTTCT TTAGTAGAAA AGAAAGAGAA AACCATCTTC GAATACTCTG ACATTTCGTC AGAACCAAGC CCCAAAAAAG CTAGAACCAT CAATGCATAT TTAACTGACG CTCCAATAGT TTTCTTTAGT AGAAGAAGTA AACAAGTTTC CAACGAAAGT AGTATGGTTA GTGGCAACAA GGCAACAGAT GGAGGTAACT TAATTCTGTC AGACTCAGAG TATATAGATT TAATTAATTC AGAGCCATTA GCTAAGAAAT ACATTAAACG TTTTATGATG GGCTATGAAT TTCTTAACAA TATTAAGCGA TGGTGTCTGT GGTTTGATAA TGTTGACCCA ATACAATTAA GTAAAGATCT TGAAAAAATG CCTCTTATTA AAAAGCGCAT TCATAATGTC AAAGAACTGC GTTTGAACAG CACTAAAAAG TCTACTGTCA AAAAGGCAGA AACACCTCAT TTGTTCGATG AAAGACGGCA TACTAATAAA CCTTACGTTG CAATACCCGT CGTATCATCA GAGAACAGAA GATTTATACC GATTGGCTTT ATTGATGGTA ACACCGTAGC AGGTAACAAG TTATTTGTAA TTGTAGATGG TAATACCTAT CAGTTCGGTA CTCTGTCTAG CAGTATGCAT AACGCATTTA TGAGACTAAC AGCGGGTAGA ATGAAAAGTG ACTATAGCTA TTCAAGCACC ATTGTTTATA ACAACTTTCC TTACCCATTT ATGGCTGATG ATCATAGTGA TAAAGCACAA AAAGCGAGAG AAAGCATAGC TAAGGCTTCA CAACAGGTTT TAGATGCTCG TAAACACTAT CAAGACGGTA GTGAGAACGC ACCAACCCTG GCTCAGTTAT ACAATACCTA TCTAATTGAT CCATATCCAC TACTAACCAA GGCTCATAAA GCGTTAGATA AGGCCGTTGA TAGTGCTTAT GGTTATCGTG GCAAAGGTGA TGATGCGAGT CGAGTCGAGT TTTTGATTAA GAAGATTGCT GAGTTAAAAA ATTAA
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Protein sequence | MSIDYKHVRQ QLQQIVHDYK DSEGYERGQS QNFWTQVFNA YGVSGQTQTK AFEHRLKDKS NQKYVDAFIP KLVIIEQKSR GVDLNKAYTQ VSEYYDRINA KDKPRYIILC NFDEIWLYDI NNPLDIKKHQ CPLSDLPNNA EWFEFLSPES QQSNEIIEEN PINRQATEKL AKLHQAFIED GVDPDELALF LTRLIFCFFA DDTAIFGKKH VLHNLLKNHA ATDGSNLQQI LTTLFDTLNT EHRSSRLPEH YAQFAYINGG LFEETINIPY FDEKLYNLVM ECDALDWTEI SPAIFGSMFQ SVLDASGGDS TEDKRREFGA HYTSEKNILK VINSLFLQEL RDEFSKCTNN TPRAVQLYEK LPTLKFFDPA CGCGNFLIIA YRELRLLENQ LIAKIFGDQK GLLDISSMCN VTVDQFYGIE IEPHAVHIAR VAMWITDHQL NMTTAERFGT TRPTTPIVYS PHIIEGNALQ IDWETVLPAN DCSYVMGNPP FIGKSNQSSE QKSDIKLVAS HIKNHKSLDY VAGWYIKSMH YMQSVNNANH YIDTAFVSTN SIVQGEQVDI LWRYLIDDCK GHINFAHHTF KWSNEGKGIA AVHCIIVGFS LVEKKEKTIF EYSDISSEPS PKKARTINAY LTDAPIVFFS RRSKQVSNES SMVSGNKATD GGNLILSDSE YIDLINSEPL AKKYIKRFMM GYEFLNNIKR WCLWFDNVDP IQLSKDLEKM PLIKKRIHNV KELRLNSTKK STVKKAETPH LFDERRHTNK PYVAIPVVSS ENRRFIPIGF IDGNTVAGNK LFVIVDGNTY QFGTLSSSMH NAFMRLTAGR MKSDYSYSST IVYNNFPYPF MADDHSDKAQ KARESIAKAS QQVLDARKHY QDGSENAPTL AQLYNTYLID PYPLLTKAHK ALDKAVDSAY GYRGKGDDAS RVEFLIKKIA ELKN
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