Gene PsycPRwf_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2393 
Symbol 
ID5204471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009516 
Strand
Start bp2447 
End bp5251 
Gene Length2805 bp 
Protein Length934 aa 
Translation table11 
GC content38% 
IMG OID640593622 
ProductType II restriction enzyme methylase subunits-like protein 
Protein accessionYP_001274371 
Protein GI148641527 
COG category[V] Defense mechanisms 
COG ID[COG1002] Type II restriction enzyme, methylase subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.233566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATAG ATTACAAGCA CGTCAGACAA CAATTACAAC AAATCGTTCA CGACTATAAA 
GACTCTGAGG GCTATGAGCG TGGCCAAAGC CAAAACTTTT GGACTCAAGT GTTTAATGCT
TATGGCGTGT CTGGCCAAAC TCAAACTAAA GCATTTGAAC ATCGTCTTAA AGACAAATCT
AATCAAAAAT ACGTTGATGC TTTCATCCCC AAATTGGTCA TAATTGAGCA AAAAAGTCGT
GGTGTAGATT TAAATAAAGC CTATACACAG GTGTCTGAGT ATTACGATCG TATTAACGCT
AAAGACAAGC CTAGATACAT CATCTTATGC AACTTCGATG AAATTTGGCT GTATGACATC
AACAACCCAT TAGATATTAA AAAGCATCAA TGTCCACTCT CTGATCTGCC AAACAACGCT
GAATGGTTCG AGTTCTTATC GCCTGAAAGC CAACAATCTA ATGAGATTAT CGAAGAAAAC
CCCATCAACC GACAAGCTAC TGAAAAGCTA GCTAAACTGC ACCAGGCTTT CATTGAGGAT
GGTGTAGATC CTGATGAATT AGCCTTATTT TTAACACGCC TAATCTTCTG TTTCTTTGCT
GACGACACCG CTATTTTTGG TAAAAAACAC GTACTGCACA ATTTGTTAAA AAACCATGCA
GCCACCGATG GTAGTAACTT ACAGCAGATA CTAACCACTT TATTTGACAC ATTAAACACT
GAGCATCGTT CAAGCAGATT GCCTGAGCAT TATGCTCAAT TCGCCTATAT CAATGGCGGT
CTTTTTGAAG AAACTATCAA CATCCCTTAT TTCGATGAAA AGCTATATAA CCTAGTTATG
GAGTGTGATG CACTCGATTG GACTGAGATT AGCCCTGCAA TCTTCGGTTC GATGTTCCAG
AGTGTATTGG ATGCTAGTGG GGGAGATAGC ACTGAGGATA AACGGCGTGA GTTTGGTGCT
CACTACACCA GTGAGAAGAA TATTCTAAAA GTCATCAACT CATTGTTTTT ACAAGAGTTA
CGTGATGAGT TTTCTAAGTG TACTAACAAC ACACCAAGAG CCGTACAGCT ATATGAAAAA
CTGCCTACAC TAAAGTTCTT TGACCCTGCT TGTGGTTGCG GTAACTTTTT AATCATTGCC
TATCGTGAAT TACGTCTATT AGAAAACCAG TTGATTGCCA AGATATTTGG TGATCAAAAG
GGATTACTTG ATATTAGCAG TATGTGTAAT GTGACCGTAG ATCAGTTTTA CGGCATTGAG
ATTGAACCTC ATGCCGTTCA TATCGCTCGT GTTGCTATGT GGATCACTGA CCACCAGTTA
AACATGACCA CTGCGGAGCG TTTTGGCACA ACCAGACCGA CCACACCGAT TGTTTATAGC
CCTCATATTA TTGAAGGTAA TGCCTTACAA ATAGATTGGG AAACAGTCTT ACCTGCCAAT
GATTGTAGCT ATGTAATGGG AAATCCTCCA TTTATCGGGA AATCCAATCA AAGTTCTGAA
CAAAAGTCAG ATATAAAATT AGTAGCTAGC CATATTAAAA ATCACAAGTC TTTAGACTAT
GTAGCAGGTT GGTATATAAA ATCCATGCAT TATATGCAAT CAGTTAATAA TGCAAATCAT
TATATAGATA CAGCTTTTGT ATCAACAAAC TCGATAGTTC AAGGTGAGCA AGTTGACATC
CTATGGAGAT ATCTAATTGA TGATTGCAAA GGCCATATAA ACTTCGCACA TCATACCTTT
AAATGGAGCA ATGAGGGCAA AGGGATAGCT GCGGTTCATT GCATTATTGT TGGCTTTTCT
TTAGTAGAAA AGAAAGAGAA AACCATCTTC GAATACTCTG ACATTTCGTC AGAACCAAGC
CCCAAAAAAG CTAGAACCAT CAATGCATAT TTAACTGACG CTCCAATAGT TTTCTTTAGT
AGAAGAAGTA AACAAGTTTC CAACGAAAGT AGTATGGTTA GTGGCAACAA GGCAACAGAT
GGAGGTAACT TAATTCTGTC AGACTCAGAG TATATAGATT TAATTAATTC AGAGCCATTA
GCTAAGAAAT ACATTAAACG TTTTATGATG GGCTATGAAT TTCTTAACAA TATTAAGCGA
TGGTGTCTGT GGTTTGATAA TGTTGACCCA ATACAATTAA GTAAAGATCT TGAAAAAATG
CCTCTTATTA AAAAGCGCAT TCATAATGTC AAAGAACTGC GTTTGAACAG CACTAAAAAG
TCTACTGTCA AAAAGGCAGA AACACCTCAT TTGTTCGATG AAAGACGGCA TACTAATAAA
CCTTACGTTG CAATACCCGT CGTATCATCA GAGAACAGAA GATTTATACC GATTGGCTTT
ATTGATGGTA ACACCGTAGC AGGTAACAAG TTATTTGTAA TTGTAGATGG TAATACCTAT
CAGTTCGGTA CTCTGTCTAG CAGTATGCAT AACGCATTTA TGAGACTAAC AGCGGGTAGA
ATGAAAAGTG ACTATAGCTA TTCAAGCACC ATTGTTTATA ACAACTTTCC TTACCCATTT
ATGGCTGATG ATCATAGTGA TAAAGCACAA AAAGCGAGAG AAAGCATAGC TAAGGCTTCA
CAACAGGTTT TAGATGCTCG TAAACACTAT CAAGACGGTA GTGAGAACGC ACCAACCCTG
GCTCAGTTAT ACAATACCTA TCTAATTGAT CCATATCCAC TACTAACCAA GGCTCATAAA
GCGTTAGATA AGGCCGTTGA TAGTGCTTAT GGTTATCGTG GCAAAGGTGA TGATGCGAGT
CGAGTCGAGT TTTTGATTAA GAAGATTGCT GAGTTAAAAA ATTAA
 
Protein sequence
MSIDYKHVRQ QLQQIVHDYK DSEGYERGQS QNFWTQVFNA YGVSGQTQTK AFEHRLKDKS 
NQKYVDAFIP KLVIIEQKSR GVDLNKAYTQ VSEYYDRINA KDKPRYIILC NFDEIWLYDI
NNPLDIKKHQ CPLSDLPNNA EWFEFLSPES QQSNEIIEEN PINRQATEKL AKLHQAFIED
GVDPDELALF LTRLIFCFFA DDTAIFGKKH VLHNLLKNHA ATDGSNLQQI LTTLFDTLNT
EHRSSRLPEH YAQFAYINGG LFEETINIPY FDEKLYNLVM ECDALDWTEI SPAIFGSMFQ
SVLDASGGDS TEDKRREFGA HYTSEKNILK VINSLFLQEL RDEFSKCTNN TPRAVQLYEK
LPTLKFFDPA CGCGNFLIIA YRELRLLENQ LIAKIFGDQK GLLDISSMCN VTVDQFYGIE
IEPHAVHIAR VAMWITDHQL NMTTAERFGT TRPTTPIVYS PHIIEGNALQ IDWETVLPAN
DCSYVMGNPP FIGKSNQSSE QKSDIKLVAS HIKNHKSLDY VAGWYIKSMH YMQSVNNANH
YIDTAFVSTN SIVQGEQVDI LWRYLIDDCK GHINFAHHTF KWSNEGKGIA AVHCIIVGFS
LVEKKEKTIF EYSDISSEPS PKKARTINAY LTDAPIVFFS RRSKQVSNES SMVSGNKATD
GGNLILSDSE YIDLINSEPL AKKYIKRFMM GYEFLNNIKR WCLWFDNVDP IQLSKDLEKM
PLIKKRIHNV KELRLNSTKK STVKKAETPH LFDERRHTNK PYVAIPVVSS ENRRFIPIGF
IDGNTVAGNK LFVIVDGNTY QFGTLSSSMH NAFMRLTAGR MKSDYSYSST IVYNNFPYPF
MADDHSDKAQ KARESIAKAS QQVLDARKHY QDGSENAPTL AQLYNTYLID PYPLLTKAHK
ALDKAVDSAY GYRGKGDDAS RVEFLIKKIA ELKN