Gene Lreu_1932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1932 
Symbol 
ID5188867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1984431 
End bp1985999 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content41% 
IMG OID640591770 
Productamidohydrolase 3 
Protein accessionYP_001272501 
Protein GI148545131 
COG category[R] General function prediction only 
COG ID[COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGA CATTTATTAA CGGTAAAATC TTTGTTGGTG ATACTGAGGA TCATTTTGTT 
AATAGCATGG TAGTTGAAGA TGGAACGGTT AAACGAATTG GTGATAATTT ACCTAATGAA
GGCGAAGTGA TTGATCTGCA AGGACAAACA GTTTTGCCAG GATTAATTGA CTGTCATACC
CATCCTAAAT ATATCGCTGA TGCCCTCCAT GGTGTTGCTT GTACCCCGCC AAATGTTAAT
AGTATCAAGG AAATGCAAGA AGCACTTCGT AACTCTCCTG CATATGGTCA AGGCGAAGAT
GGGTGGATTG AAGGTTGGGG TTTTGATGAG ACAAAATTAG CAGAACATCG GAGTCCTAAC
CGTGATGATT TAGATGCTGT GTCAACAACG CAACCAATCT TTATTTATCG CTCTGACTGT
CATTCTTCTG TCGGCAATTC TAAAGCCTTG GAACTTGCAG GAATTGATGA AAATACGCCT
GACCCGGTTG GTGGGAAAAT TGAACGATTT GCTGATGGAC GACCAACTGG TTTTATGCGC
GAAGTAGCTG CCTCGCAACT TCTTATTCGG GCTAAATCGG CACAAAGTTA TGAAAATGAC
GTAGCTAATA TGGTTAATAG TTCCGAACAC TATCTTAAAG AAGGAATTGT GGCAATTGGT
GAAATGATGG GCCGGATGAA GCCATATACT TCTTTAAAAC TATACCAAGA TGCAGTTAAA
CAAGGGTTTG GTCCTAAGGC TTCGATCTAC TATGTTTTTG ATGAAATTGA TCCGCAGGTT
GGACTGCAAC CAAGCGGGGA TGAAAAACTC CGCGTTGCTG GAATTAAAGT CTTTATGGAT
GGGAGTATTT CTGGTGAAAC GGCCTATAAT ACTGATCCTT ATCCATCGGG AAAAATGGGA
GTTAGTTTGA CTTCAGTGGA AAAGCTTAAG CGAGCAGTAA AGATGGCTCG TGATAATAAG
CTTCAACTAG CTGTGCATGC GATGGGCGAT AAAGCAATTC AAACAGTAAT TGATGTAACA
AAAGAGATGG AGCCATGGCT AACAACGATG CCATCAGTAA GAATTGAGCA TGCCTCCTTA
ATGACTGATC AAATGTTTGC AAAGATTGCC AATAGTAAAA TGAACTATGC GTTAGTCACG
CAACCAATCT TTTTCTTTGC AGAAGATGAA TCCTATCGGC ATTACCTTTC TCCAGCACAG
TTTAAATTAG CTTACCGCGT CAAAACAATG TTAAATTCTC AAGCAATGTT AGGTTTGAGT
TCGGATGCCC CATGTACGCC ATGGGCAGAA CCTGATAGCC CGTTTTATAG TATTTATGCG
GCTGTAACGA GAAAGGCAGC TAATGACGAT ATTGTTAACG CAGAAGAAGC AATTACAGTT
CCACAAGCTA TTCTTGGTTA TACTCGGGAT GGTGCTAAGA TTGGCGGCTT TGATGATAAT
GGAACGCTTG AAGTAGGAAA GGCAGCGGAC TTTGTTATCT TAAATGATGA TATCTTTACA
GTTGCTCATA GTGAACTTAA AAATATTCAC GTGAATGAAA CTTGGATGGC GGGGAAGAGA
GTTATGTAG
 
Protein sequence
MTQTFINGKI FVGDTEDHFV NSMVVEDGTV KRIGDNLPNE GEVIDLQGQT VLPGLIDCHT 
HPKYIADALH GVACTPPNVN SIKEMQEALR NSPAYGQGED GWIEGWGFDE TKLAEHRSPN
RDDLDAVSTT QPIFIYRSDC HSSVGNSKAL ELAGIDENTP DPVGGKIERF ADGRPTGFMR
EVAASQLLIR AKSAQSYEND VANMVNSSEH YLKEGIVAIG EMMGRMKPYT SLKLYQDAVK
QGFGPKASIY YVFDEIDPQV GLQPSGDEKL RVAGIKVFMD GSISGETAYN TDPYPSGKMG
VSLTSVEKLK RAVKMARDNK LQLAVHAMGD KAIQTVIDVT KEMEPWLTTM PSVRIEHASL
MTDQMFAKIA NSKMNYALVT QPIFFFAEDE SYRHYLSPAQ FKLAYRVKTM LNSQAMLGLS
SDAPCTPWAE PDSPFYSIYA AVTRKAANDD IVNAEEAITV PQAILGYTRD GAKIGGFDDN
GTLEVGKAAD FVILNDDIFT VAHSELKNIH VNETWMAGKR VM