Gene Lreu_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1924 
Symbol 
ID5190044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1977587 
End bp1978609 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content38% 
IMG OID640591762 
Productbeta-lactamase 
Protein accessionYP_001272493 
Protein GI148545123 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones82 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG TTAACTTATA TATTTTTTTG ACGCTCTGTT CCTTTGCCAT CTTCTTATTG 
ACCACGCCAT CAAAGATAAA GGCAGAAGTA GTTGACAAGC AAACGCAACA TCAACTTCAA
GATTATATGA AGAACCATCA TATTAATGGG GTGATGCTAG TTAATGGCAA AGATGGGAAG
CCAGTTACCA TTGAGAATAA TGAAACCACG AATAAGGATC AAATCGTAAA GGCGGATCGA
CTATTTCCCA CGGCATCGCT TCAAAAGATT GTAACGGGAA CCGCTGTCTA CCAATTAAGG
CAAAAAAAGC AATTAGATTG GGACACTTCG CTAAGTAAGT ATTACCCGCA GATTGACGGT
AGTAAAGAGA TTACAATTCG GGAATTAATG AACCATACCA GTGGCTTGAT TAATAATGAT
CGTCCATTTG AACCACTTAG AGGCCAAAAA GCCCAAATTG CTTATATGCT TAAACATCTC
AAGTATGATC ATACGCATAC ATGGGATTAT CAAGATGTTG ATTATGAAAT CTTGGCAGCC
ATTATTAGTA AGCAAACGCA TCAAAGCTAT AATACCTATA TTCGAAAAAA CTTTGCTAAA
CCGCTCCATC TTCACCAAAT TAAAGACTTT TCTGAAGTTT CAAAAAAGGA AATTCCACAA
CCTATGGATC CAACAGTTGA TTGGCACCGG GTAACTGTAA CGACCTCCTC AGACTTTGGA
GCAGGGAACC TTTTTATATC GCCAAATGAT TACTGGAAGT TTGTATATAA TGAGGTGCTG
AAAGATCCCA AAATGATCAA TGAATACTAC CAACAGGCGC AGCATCAAGA AGTTGCCTAT
TTTGGTGGAG TCTACTTTGA TGGGGACGTT ATTCGCGCAA ATGGGAGTAT TCCTGGATAT
AACAGTTGCT TTGTCGCTGA TTACAAGACA AAACGAATGA TTATGCTATT CTCTAATAAT
ATCGATTATC TAAAATTAAA GGCAACGTCG GATGATATTC TCCATAATTA TATGGAACAC
TAA
 
Protein sequence
MKKVNLYIFL TLCSFAIFLL TTPSKIKAEV VDKQTQHQLQ DYMKNHHING VMLVNGKDGK 
PVTIENNETT NKDQIVKADR LFPTASLQKI VTGTAVYQLR QKKQLDWDTS LSKYYPQIDG
SKEITIRELM NHTSGLINND RPFEPLRGQK AQIAYMLKHL KYDHTHTWDY QDVDYEILAA
IISKQTHQSY NTYIRKNFAK PLHLHQIKDF SEVSKKEIPQ PMDPTVDWHR VTVTTSSDFG
AGNLFISPND YWKFVYNEVL KDPKMINEYY QQAQHQEVAY FGGVYFDGDV IRANGSIPGY
NSCFVADYKT KRMIMLFSNN IDYLKLKATS DDILHNYMEH