| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1914 |
|---|
| Symbol | |
|---|
| ID | 5189398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 1970965 |
|---|
| End bp | 1971894 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640591755 |
|---|
| Product | auxin efflux carrier |
|---|
| Protein accession | YP_001272486 |
|---|
| Protein GI | 148545116 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 69 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATTG GGCAAATTTT TAACCAAGTC GTCATTATTT TCTTACTAAT GCTTTTAGGA
GCAGTTATTA GAAAGCTCGG ATTTCTCCAT CCACAATCAA TTAATGATTT AACCAATATT
ACACTCTACT TTTTATCGCC AATCGTAATT ATTAAGGCCT TTGAACAGCC GTTTTCGCGA
TCACGATTTT ATCAATTATT ACTATTGATT GCTGGTGTCT TTCTGACCTA TTTTGTTTCA
ATTTTGATTG CAAAACTACT TTTTCATAAA GTAAAGGACC AAAATATTCG TCAAATTGCA
ACTTATGGAA GTATCTATTC TAATAATGGC TTTATGGGCG TTCCATTAGC ACAAGGGCTT
TTCGGAAGTG TGGGTGTCTT CTATGCCGTC GCTTCAATGA TTGGTTTTAA TGTCATGTCG
TGGACTCAGG GAATTGGAAT TTTTCAAAAA CGGCAGCCTC ATGATTGGGG AACACAGTTA
AAGAAAATTA TTTTAAATCC TAATATTATT GCTATTATTA TTGGTCTTTT CCTATTCATT
AGTTCTTTTC GGTTGCCAAA ATTAATTTCT GGTTTTATTG ATTACACCAG TCCAGCGTTT
ACTCCACTAT CAATGATTGT CATCGGAAGT AATCTTGCAA ACCTAAGTAT TAAAAATATC
AAATTACCAA CTGCACTCTG GGGAAGTCTC TTCGTAAGGA ATATTTTCTT CCCGATTCTA
GGAACAATTA TCTTATTATT ATTGGGAATT ACTGGTGTTC CACTCTTCAC CACAGTAATT
CTTAGTGCAT GTCCAGTAGC AGGATTAGTC GTTCTTTTTA CCTTACAATC AAATGGGGAT
GCACGGCCAG CAACCGTCTT AATGAGTATT TCAACCATTT TGAGTTTAGT AACTATTCCA
TTAGTCTATT GGTTTGCTAG TCTATGGTAA
|
|---|
| Protein sequence | MSIGQIFNQV VIIFLLMLLG AVIRKLGFLH PQSINDLTNI TLYFLSPIVI IKAFEQPFSR
SRFYQLLLLI AGVFLTYFVS ILIAKLLFHK VKDQNIRQIA TYGSIYSNNG FMGVPLAQGL
FGSVGVFYAV ASMIGFNVMS WTQGIGIFQK RQPHDWGTQL KKIILNPNII AIIIGLFLFI
SSFRLPKLIS GFIDYTSPAF TPLSMIVIGS NLANLSIKNI KLPTALWGSL FVRNIFFPIL
GTIILLLLGI TGVPLFTTVI LSACPVAGLV VLFTLQSNGD ARPATVLMSI STILSLVTIP
LVYWFASLW
|
|---|
| |