Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1896 |
Symbol | |
ID | 5188361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1954859 |
End bp | 1956001 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640591739 |
Product | membrane protein-like protein |
Protein accession | YP_001272470 |
Protein GI | 148545100 |
COG category | [S] Function unknown |
COG ID | [COG1511] Predicted membrane protein |
TIGRFAM ID | [TIGR03061] YhgE/Pip N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 73 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAAC TATTAAAAAA CAAATTTTTA TGGTTACCAA TTATAGTAGC TTTATTTATC GGAGCCTACT TTTCAATTAC TGCAATACCT TCAACTCATG TTAAAGTTAA CGATTTGCCA ATCGCTATTG TAAATGAAGA TAGCGGAGTA ACTGGGGAAA ATTTGGCGAA ACAAATAACA GAAGCAACTA GTTCTTCAAA CTCTTCAGCA ATGAGTATTA AATGGACAGT GTTTGACTCT GAAAAAAAGC TATTAAAAGA TATGAATCGA GAAAAATATT ATGGGGCAAT TGTTATCCCT AAAGATTTTT CAGAAAAACT TCAAAGTTTA ACAGCACCTA ATGCACAAAA AGCAGAATTA AAGATTATTA TTAATCAGGG AATGGGAACA ACTGTTACAA CCCAAGTCAA TACTGCATTG ACGCAGATGA CAACTCAATT AAACAATAAA CTCAGCACTA ACTTACTACA AAACGTAGCG AATAGGTCAA CATCAATTCC AGCAACAATG GCATTGAATT TATCTAATCC ATTAACCATA AAAAAAGAAA AGGTTAATAA AACTGGCGAT TTGGCAAATG GTGGCGCACA TTTCTTTCAA TCGGTATGGC TTGGAAGCCT AGGAACGTCA ATGCTTTTAG GATTTGCATT CTCAAAAATT CGATTTAAAT CGCTTAAAGA AAAATTTTCA GCTTTGTTTG TTCAACTAAT AGCTGCTGGG ATATCAGCTT TAGTGATCGG TTATGGAGTT CCCGCATTAC AATCTTGGAT TTTGGATGTC AATATTCCTA ACTTTACTGA ACTGGGACTA TTTATGTCGC TATGTGCTTT TGCCTTCATT ATCTTCATTA ATGGGGTAGA ATCATGGGTT GGGATAATTT CAATTCCAGT TTTTATGTTA CTGCTATTCT TTGCAGCGCC ATTATTGACT GCAGTTCCTG AATCGTTGAA TGGTTTTTAT AGTACATTAG CTGATTGGCT TCCGATGTCT TACATGTATA GGGGAGTAAA AAGCATTATG TACTTTAACC ATGGACCTGC AAACTCTGTG GTGATGGGAC TAATCTATAC GATAATTACA GGATTAATTC TAATAATTAC CGCTCAATTT AAGAAGGATA ATAAGAAAGA AGGTAGCAAC TAA
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Protein sequence | MLKLLKNKFL WLPIIVALFI GAYFSITAIP STHVKVNDLP IAIVNEDSGV TGENLAKQIT EATSSSNSSA MSIKWTVFDS EKKLLKDMNR EKYYGAIVIP KDFSEKLQSL TAPNAQKAEL KIIINQGMGT TVTTQVNTAL TQMTTQLNNK LSTNLLQNVA NRSTSIPATM ALNLSNPLTI KKEKVNKTGD LANGGAHFFQ SVWLGSLGTS MLLGFAFSKI RFKSLKEKFS ALFVQLIAAG ISALVIGYGV PALQSWILDV NIPNFTELGL FMSLCAFAFI IFINGVESWV GIISIPVFML LLFFAAPLLT AVPESLNGFY STLADWLPMS YMYRGVKSIM YFNHGPANSV VMGLIYTIIT GLILIITAQF KKDNKKEGSN
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