Gene Lreu_1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1857 
Symbol 
ID5190035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand- 
Start bp1915079 
End bp1915768 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content36% 
IMG OID640591701 
ProductABC transporter related 
Protein accessionYP_001272432 
Protein GI148545062 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAT TGAAGTTAGT AGATGTTAAC AAATATTATG GCGAAGGAAT TAGCCGTGTT 
CATGTTCTTA AAGATGTTAA TTTTTCTGCT AAAGCGGGAG AATTAAATTT GATTTTAGGG 
CCTTCTGGAT CAGGAAAGAG TACCTTTTTA ACAATTGCGG GCGGTTTACA AACGCCTACT 
TCCGGAAAAG TGTTAATTGA TGGAATTAAT ATTGAAAAGT TATCTTCTAA AAAACGTGAT 
GAACTGCGCT TGCAGAAAAT TGGTTTTATT CTTCAGTCGT ATAACTTGCT ACCTTATCTA 
AATGTGGCTG ATCAATTTAA ACTTGTTGAT CGTGTAAAGA AGAGCGGTAA TATTTCATCA 
GCAGCTTTTG ATGAATTATT GGAAAAACTC GCGATAAAAA AACTGCTCAA GCAATACCCT 
TCTGAATTGT CAGGAGGTCA AAACCAACGA GTAGCGATTG CGCGTGCTTT ATATACCGAT 
CCTGAGATAA TTCTTGCAGA CGAACCAACA GCAGCTTTAG ATAGTAATTT AGTAAAGTCA 
GTGGGACAAT TATTTCAAGA TCTGGCTAAA AAGAAAGGAA AAGCGGTGAT TGCTGTAACC 
CATGATTTAC GTTTACGTGA ATATGCAGAT AATGTTTACG AGTTAGCCGA TGGGAAACTT 
ACATTAAGCA AAAATTCCAC AGACCAATAA
 
Protein sequence
MSKLKLVDVN KYYGEGISRV HVLKDVNFSA KAGELNLILG PSGSGKSTFL TIAGGLQTPT 
SGKVLIDGIN IEKLSSKKRD ELRLQKIGFI LQSYNLLPYL NVADQFKLVD RVKKSGNISS 
AAFDELLEKL AIKKLLKQYP SELSGGQNQR VAIARALYTD PEIILADEPT AALDSNLVKS 
VGQLFQDLAK KKGKAVIAVT HDLRLREYAD NVYELADGKL TLSKNSTDQ