| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1822 |
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| Symbol | |
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| ID | 5190107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 1874648 |
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| End bp | 1875970 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640591667 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001272398 |
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| Protein GI | 148545028 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.286977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGAGC TATTTGAACA TTCTTCAATC AAGCGGGCAT ACTTTACGCT GGCCTTACCT
GTTGTATTAA GCATGGCTGT AACCTTGATT TATAACATGG TTGATACTTT TTTCGTGGCC
AAAACTGGGA ATCCCAATTT AGTTGCCGGT GTTTCTCAGG GAGCACCAAT TTTTACGTTA
ATGATTGCTC TTGGGGATAT CTTTGGCCTT GGCGGTAGCT CAGTTATTTC CCGCTTATTC
GGTGAGCACC GTGATAAATT AGCACGTTTT GTCAGTGGCT ATTGCTTCTA TGCACCGATT
ATTTGTGGAA TCATCGTAAC TGCAATAATG ATTATCTTTC AAACACCAAT TTTACATTTA
TTGGGTGCTT CTCCTGCCAC TTGGAAATAT GCACGTGAAT ATTACTTGGT GATCGCTTGG
GGTGCGGTTT TCATCATTTT TGGCCTTTCA CCAACTAATA TTTTACGAAC AGAAGGGCTA
GCCATTCAGT CGATGATCGC TAGTATGGTA GGGACTGGAA TTAATATTGT CTTAAATCCG
ATCTTTATTT TCACGTGTGG GCTCGGCGCT GCTGGTTCCG CACTAGCTAC TGTAACAAGT
GCTGTTATTG GCGATATTTT AATGATTTAT TATTTGCGAA CAAAGAGTAA AAAGCTGACG
ACTTCAATTC ATGAAACAAA AATCGGCTGG AAACTCCAAT TTGAAATCTA CGCTATCGGA
ATCCCGGCCT CGGTTACTAA CATTATGGCA ACGTTTGCGG TTGCGTTAAC TAATCGTTAC
TTGATTGTTC ATGGCGCGGA TAGTGTAGCT GCCATGGGGA TTGCGATGAA AGCAAATATG
ATCATTAATA TGGTAATGGT TGGTTTTGCA TTCGGCGCGC AACCCTTGAT CGGATACGTA
TATGGCGCTA AAGATGAGCA ACGGTTTAAT AAAGTTGTTA AATTTGATAT TCAAGTTGTT
GCTAGTCTTG CCTTTATGCT CACTATTATT CTTTTCATTT TTGCTCCCCA GGTTATTCGC
ATTTTCATGA ATGATCCCCA AATAGTAAAA GAAGGTGCCT TGATGCTTCG CTGGCTATCA
GTTTCGACTA CTCTTGCTGG TATCATTCTT GTTTTTACAA CCATGTTCCA ATCAATGGGA
AAAGCAACGC CTGCATTTTG GCTCTCATTC TGTCGTCAGG GATTGATTTT CGGGGTAGTG
ATTAGTACTT CCGCAAAATT ATTTGGTTAT ACTGGAATCA TTGCTGCTCA GGCTATTTCT
GATTGTTTAA CCTTTATCCT GGCACTTATT TTCTTCTATT GTTATCGCCC ACGTTTTAAA
TAA
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| Protein sequence | MDELFEHSSI KRAYFTLALP VVLSMAVTLI YNMVDTFFVA KTGNPNLVAG VSQGAPIFTL
MIALGDIFGL GGSSVISRLF GEHRDKLARF VSGYCFYAPI ICGIIVTAIM IIFQTPILHL
LGASPATWKY AREYYLVIAW GAVFIIFGLS PTNILRTEGL AIQSMIASMV GTGINIVLNP
IFIFTCGLGA AGSALATVTS AVIGDILMIY YLRTKSKKLT TSIHETKIGW KLQFEIYAIG
IPASVTNIMA TFAVALTNRY LIVHGADSVA AMGIAMKANM IINMVMVGFA FGAQPLIGYV
YGAKDEQRFN KVVKFDIQVV ASLAFMLTII LFIFAPQVIR IFMNDPQIVK EGALMLRWLS
VSTTLAGIIL VFTTMFQSMG KATPAFWLSF CRQGLIFGVV ISTSAKLFGY TGIIAAQAIS
DCLTFILALI FFYCYRPRFK
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