Gene Lreu_1820 details

Gene Information

• Locus tag: Lreu_1820
• ID: 5189574
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: +
• Start bp: 1873476
• End bp: 1874039
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640591665
• Product: permease cadmium resistance protein-like protein
• Protein accession: YP_001272396
• Protein GI: 148545026
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG4300] Predicted permease, cadmium resistance protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.00135691
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTGGT GGATTATTTT TATCACATTT CTTGCCGTAA ACCTCGATTT CTTTTTCATC 
TTAATCTTTT TACTCGAAAG GTATAACCTT CGTGATGTAA TCATTGGCTA TCTTGGTGCC 
CTTCTTGTTC TGGTTACCAT CAGCTTTTTA CTAGGAAAAA CTCTCGCCAT TTTCCTCCCT 
GAATGGATTT TAGGAATACT AGGGATCCTG CCAATTTACA TGGCTCTGCA CGACAACGAT 
GAAGACCCAA CTCATGCAGA AAAGCACGGT CCAATTATTA CCACCTTAAT AACCTATCTG 
GCAGTTTGCG CTGGTTGTAA CCTCTCAATT TTCTTACCAA TTTTAACGAA TCTTACCTTC 
CAGCAATTTA CTCAGGCACT TCTTTTTATC GCAGTCCTTT CAATTGCGAT CGTGATTCTC 
ATTAAGGGAA TTGGTAATAT TCCACTAATT AAGCAAGCAA TGCAACGTTA TAGTGAAACC 
TTAATGAAGG TTATTTACAT TGGAGTTGGT TGTTATGTTT TTTGGGACAG TGGATTAATT 
ACCCACCTTA TTCACCTTCT TTAG 

 

Protein sequence

MNWWIIFITF LAVNLDFFFI LIFLLERYNL RDVIIGYLGA LLVLVTISFL LGKTLAIFLP 
EWILGILGIL PIYMALHDND EDPTHAEKHG PIITTLITYL AVCAGCNLSI FLPILTNLTF 
QQFTQALLFI AVLSIAIVIL IKGIGNIPLI KQAMQRYSET LMKVIYIGVG CYVFWDSGLI 
THLIHLL